Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1317 ATGGAAAGGCCTAGGCTTGTTGAGGAATGCCAGGTTCGTCCCAATGCTCCCACAACCATGTCTCTTCCCCTCACATTCCTTGACATACCCTTAGCAGGTCCAATTTATGTTAGACGCCAATTCTTCTATAACTTCTCTGAATCCACCCACCATTTCTGCGAAACCACACTCCCAACTCTAAAACACTCTCTTTCTCTGGCCCTTCAAAGTTTCTCCCCTCTTGCTGGTAACCTCCTATGTCCTCCAACGCCGGAGAAGCCCGTCATAGAATGCACCGATAAAGACACTGTTACCTTCACAGTCATGGAGTCTACCTCGGATTTCAACCATCTCTCAAGCAACGAACCCAAAAGCCTCAAAGATTTGAAACACTTGTCTCCCAATTTAACATGCAAAAGCAAAACCAAGCATGACGATGTCGATGATGTCACGATCGTGTTCTCACTTGTGGCCTTGCAAGCCACGGTTTTCCCAAGCAGTGGGCTTTGCATCGCTATCACCTATTGTCACGTGATGGACGGTAGGATCTGTGACCAATTCATGAGGACTTGGTCTTCCCTATGTAGAAAAGGCTTTGGAAAAGTCGTTGAGTCACCCCCACCACCACCTTGCTTCGATAGGGAAGTGTTGAAGGACCCCAAGGGACTCGAGGCTATTTTCTTGAGAGACTACTTCCATGAGAGGTCAACCTGGAAGGACAAATTAATCATTGGTCAAAGCCAAAGTCAATGTTCGGAGTCATCGGTGGAACAAGACTATGTTAAGGCAACGATTGTGTTTAGTAAAGAACAGATCGAAGGGATGAAAAGTTTTGCTTTGAAACAAATACAATTGAAGACAAGCGCGGAGGAATTCAAAGCGCCGCAATATCTATCAAAGTTTGTGGTGACATGTGCTTTTGTGTGGAGTAGCTTGGTTAAAACAAGGCATAGAGATAATAACCATCATGATGATGAAGACGAAGATGAAAAGAATAATATGAAAGAGGAGTTCTTTCGTTTTGCGGCGGATTGTAGGGGCGATCGACTTGGGTACCCAATACCAGAGACTTACTTCGGGAACTGCATAACGATATGCTACGCAAAGCTGAAAAGAATGAACCTAAAGGGAGAAGGGGGTTTTGTGAACGCTGTGAGGGTCATTGAAAGGGCTATAAACGACATGAAGAGTGAGCCGTTTCGGGGAGCGGAAAACTGGAAGGAGTCGTTTACGAGGATGATTGAGTTGGGGAGTGGGTTGCTTGTTACGGGGTCGCCCAAGTTCGCTGTGTATGAGACTGATTTTGGGTTTGGAAGGCCCAGCAAAGTGGAGATGGTGCATTACACCAAGGTCATGTCTATTGCTGAAACTGGGCACAGTGAAGGAGGACTTGAGGTTGGCCTGGTATTTAGGATGGGTGAATTTGAAAGTTTTGATAATGTCCTTAAACAAGGGCTTGAAGCGTTCATATTCTAA 1455 0.4564 MERPRLVEECQVRPNAPTTMSLPLTFLDIPLAGPIYVRRQFFYNFSESTHHFCETTLPTLKHSLSLALQSFSPLAGNLLCPPTPEKPVIECTDKDTVTFTVMESTSDFNHLSSNEPKSLKDLKHLSPNLTCKSKTKHDDVDDVTIVFSLVALQATVFPSSGLCIAITYCHVMDGRICDQFMRTWSSLCRKGFGKVVESPPPPPCFDREVLKDPKGLEAIFLRDYFHERSTWKDKLIIGQSQSQCSESSVEQDYVKATIVFSKEQIEGMKSFALKQIQLKTSAEEFKAPQYLSKFVVTCAFVWSSLVKTRHRDNNHHDDEDEDEKNNMKEEFFRFAADCRGDRLGYPIPETYFGNCITICYAKLKRMNLKGEGGFVNAVRVIERAINDMKSEPFRGAENWKESFTRMIELGSGLLVTGSPKFAVYETDFGFGRPSKVEMVHYTKVMSIAETGHSEGGLEVGLVFRMGEFESFDNVLKQGLEAFIF* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1317 484 Gene3D - 250 482 IPR023213 -
Dod10g1317 484 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 482 - -
Dod10g1317 484 PANTHER - 5 482 - -
Dod10g1317 484 Gene3D - 4 236 IPR023213 -
Dod10g1317 484 Pfam Transferase family 12 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1317 Dod-Chr10 33078512 33080575 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1317 41 471 Monolignol Biosynthesis Gene Families AT5G48930 22.022 6.84e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1317 - - gmx:100813271 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1317 10 33078512 33080575 Dod10g1317 10 33078512 33080575 ECH