Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1316 ATGGGAAAGCCTAGCGAGCACAAGCTTGTTGAGCAATACCAGGTTGGTCCCTATGTTCCCAAAACCATGTCTCTTCCCCTCACATTCCTTGACATACCCTTAGCAGGTCCAATTTACGTTAGACGCCAATTCTTCTATAACTTCCCCTTTTCTACCCACCATTTCTACCAAACCACACTCCCAACCCTAAAACACTCTCTTTCTCTCACGCTTCAAAGTTTCTTCCCTCTTGCCGGTAACCTCCTATGTCCTCCACCACCCCACAAGCCCTTCATCCGATGCACCGAAGAAGACACCGTTACCTTCACAATTACCGAGTCCGCCTCCGATTTCAACCGTCTCTCAAGCAACAACCCCAAAAGCCTCAAGGATTTGGATCACTTGGTTCCCAAGTTGACATGCAAAACCATGCATGACGACGATGACACATTCGTGTTCCCACTTGTGGCCTTGCAGGCCACGGTATTCCCAAACCGAGGCCTTTGCATCGCCATCACCTATTGTCACGTGATCGACGATAGGTGCTGTGGCCATTTCATGAAGACTTGGTCTTCCCTATGTGGAAGAACCATTGGTGGAGAAGTTGCTAAGTCGTCACCACCACCCCCGTGCTTAGATAGGGAAGTGTTGAAGGACCCCAAGGGACTCGAGGATGTTTTCTTGAGAGACTATTTCCTCGAGAGGTCAACTTGGAAGGACAAATTAATCACTGGTCAACTTCAAAGTCAAAGTCAAAGTTCTGAGTCAGCAGTGGAACAAGAATATGTTAAGGCAACGATTGTGTTTAATAAAGAACAGCTCGAGGGGATGAAAAGGTTTGCTTTGAATCAACTGAAGAAAAGCGAGGAAAAACTCGAAGCGCCGCAATATTTATCAAAGTTTGTGGTGACATGTGCTTTTGTGTGGAGTAGCTTGGTTAAAACAAGGCATAGAGATAACCACGATGAAGTAGAGAATATGAAAGAGGAGTATTTTCGGTTTGCGGCGGATTGTAGGGATCGACTTGAGTACCCGATACCAAAGACTTACTTTGGGAACTGCTTAACGAAATGCTATGCAACGCTGAAGAGAGCGGACCTAAAGGGAGAAGGTGGTTTTGTGAACGCTGTGAGGGTCATTGAAAGGGCTATAAACGACATGAAGAGTGAGCCGCTTCGGGGGGCGGAAAACTGGAAGGCGTTGTACACAAAGATGTTTGTGCTAGGGAGTGGGTTGCTTGTTACGGGTTCGCCAAAGTTCACTGTGTATGAGACTGATTTTGGGTTTGGAAGGCCTACAAAAGTGGAAATGAAGCATTCCTCCAAGGTTATGTCTATTGCTGAGGGTGGAGATAGTCAAGGAGGAGTTGAGGTTGGGGTGTTGTTTAGGAAGGGTGAATTTGAAAGTTTTGTTAGTGTCGTTGAAGAAAGGCTTGAAGCTTTTAAATCCTAA 1431 0.4626 MGKPSEHKLVEQYQVGPYVPKTMSLPLTFLDIPLAGPIYVRRQFFYNFPFSTHHFYQTTLPTLKHSLSLTLQSFFPLAGNLLCPPPPHKPFIRCTEEDTVTFTITESASDFNRLSSNNPKSLKDLDHLVPKLTCKTMHDDDDTFVFPLVALQATVFPNRGLCIAITYCHVIDDRCCGHFMKTWSSLCGRTIGGEVAKSSPPPPCLDREVLKDPKGLEDVFLRDYFLERSTWKDKLITGQLQSQSQSSESAVEQEYVKATIVFNKEQLEGMKRFALNQLKKSEEKLEAPQYLSKFVVTCAFVWSSLVKTRHRDNHDEVENMKEEYFRFAADCRDRLEYPIPKTYFGNCLTKCYATLKRADLKGEGGFVNAVRVIERAINDMKSEPLRGAENWKALYTKMFVLGSGLLVTGSPKFTVYETDFGFGRPTKVEMKHSSKVMSIAEGGDSQGGVEVGVLFRKGEFESFVSVVEERLEAFKS* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1316 476 Coils Coil 264 284 - -
Dod10g1316 476 Gene3D - 252 474 IPR023213 -
Dod10g1316 476 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 476 - -
Dod10g1316 476 Gene3D - 7 234 IPR023213 -
Dod10g1316 476 Pfam Transferase family 23 468 - -
Dod10g1316 476 PANTHER - 1 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1316 Dod-Chr10 33037271 33039069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1316 44 425 Monolignol Biosynthesis Gene Families AT5G48930 23.291 8.06e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1316 - - gmx:100813271 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1316 10 33037271 33039069 Dod10g1316 10 33037271 33039069 ECH