Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1304 ATGATCATTGCTACAGAAAAGTATGGCTTCTTTTTCATAGTCTCCGAGTTGATTGAGTCTGCTCATTTTGTTCCCTTCATCACCTCTGATTCTTCGGAATCTCATCAACTTGATTGGCTCCAGAAGATGAGGTTTAATTCCTTCTTCAAAAGGGCTTTTCACAGTCACCCTTCATGCTCCAAGCTTCTCCTCATATGCACTCTCAGTGGTGGAGGTGTGCTTTCATACTCAGGATCACAACCTGGTACTGGACCTGCTAGTACTGATTCGAATCAGCCAAGAAAAAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTCAAGGATCTCAATGCTTCACTGTATGACGTGCAGGTTGTTTCGCCTTGTAACTACTTTGCATTCACTCCTTTATTACCCAGTGTCACTTGTGGGACGGTTGAAGCACGAAGCATTGTAGAGCCAGTCCGAAATCTCATAAAAAAGAGAAAAGGAGAAATTAAATACTGGGAGGCAGAGTCCCTGAAGATTGATCCTACAAACAAGAAGGTTTTTTGTCGGTCCAATATTGACAACAACTTAGTGGGAAGCGGCGAATTTTCTGTGGACTATGACTACTTGGTTGTAGCATTAGGGGCACAAGTGAATACCTTTAACACCCCTGGTGTCAAGGAGAACTGTCATTTTCTGAAGGAGGTAGAGGATGCCCAGAAGATTAGAATTTCTGTGATAGATTGCTTTGAGAAGGCTGTTCTTCCATCTCTGTCTGAAGAAGAACGAAGAACAAATCTGCATTTTGTTGTTGTTGGTGGGGGTCCGACTGGTGTGGAATTTGCTGCTGAGCTTCATGACTATGTCCAAGAAGATTTAGTCAAGTTATACCCATCTGTCAAAGATATAGTGAAGATAACAGTAATTCAATCAGGAGATCACATCCTGAACACGTTTGATGAAAGAATTAGTACATTTGCCGAGCAGAAGTTTGGTAGAGATGGTATAGAAGTTCAAACAGGATGTCGAGTCATCAATGTTAGTGACAAGGAAATCACAATGAAGGTGAAATCAACAGGAGAGATTTGCTCTGTACCTCATGGATTGGTTGTCTGGTCCACTGGAATTGCAACTCGTCCAGTTGTTAGGGACTTCATGGAACAAATTGGTCAGGCTAAAAGGCATGTGCTAGCAACAGATGAATGGTTACGAGTGCAAGGATGTGAATCTGTGTATGCTATCGGTGATTGTTCTTCAGTAAATCAACGAAAAGTTATGGATGATATCTTGGCCATTTTTAAGGCTGCAGACAAAGACAACTCTGGTACCTTAACTGTTCAAGAATTCAAGGAAGTACTAGATGACATAATCTTAAGATATCCACAAGTCGAACATTATATAAAGAGCCAACATCTTTTTGATGTGGCTGCTCTATGGAAAGACACTCAAGGAAATGATAGAGAAGAAATAGATTTAGAAGGGTTTAAGCTGGCCCTTTCCCACGTGGATTCACAGATGAAGAGTTTGCCTGCAACTGCACAGGTTGCTGCCCAGCAGGGTGCATATCTTGCCAGATGCTTTAACCGCATGGATCAATGTGAAGAGCATCCTGAAGGTCCTCAAAAATTTAGAGAATCTGGACGTCATAAGTTCCGTCCCTTCCGGTATAAGCATTTGGGGCAATTTGCTCCTCTGGGTGGGGAGCAGGCAGCTGCAGAACTTCCAGGGGATTGGGTTTCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTGTGTATGCAAGCAAGCAAGTAAGCTGGCGCACAAGGGTGCTGGTGGTATCTGATTGGACAAGAAGATTCATATTTGGGAGAGATTCTAGTCGTATTTAA 1854 0.4293 MIIATEKYGFFFIVSELIESAHFVPFITSDSSESHQLDWLQKMRFNSFFKRAFHSHPSCSKLLLICTLSGGGVLSYSGSQPGTGPASTDSNQPRKKKVVVLGTGWAGTSFLKDLNASLYDVQVVSPCNYFAFTPLLPSVTCGTVEARSIVEPVRNLIKKRKGEIKYWEAESLKIDPTNKKVFCRSNIDNNLVGSGEFSVDYDYLVVALGAQVNTFNTPGVKENCHFLKEVEDAQKIRISVIDCFEKAVLPSLSEEERRTNLHFVVVGGGPTGVEFAAELHDYVQEDLVKLYPSVKDIVKITVIQSGDHILNTFDERISTFAEQKFGRDGIEVQTGCRVINVSDKEITMKVKSTGEICSVPHGLVVWSTGIATRPVVRDFMEQIGQAKRHVLATDEWLRVQGCESVYAIGDCSSVNQRKVMDDILAIFKAADKDNSGTLTVQEFKEVLDDIILRYPQVEHYIKSQHLFDVAALWKDTQGNDREEIDLEGFKLALSHVDSQMKSLPATAQVAAQQGAYLARCFNRMDQCEEHPEGPQKFRESGRHKFRPFRYKHLGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1304 617 PRINTS FAD-dependent pyridine nucleotide reductase signature 262 280 - -
Dod10g1304 617 PRINTS FAD-dependent pyridine nucleotide reductase signature 98 117 - -
Dod10g1304 617 PRINTS FAD-dependent pyridine nucleotide reductase signature 201 219 - -
Dod10g1304 617 SMART efh_1 422 450 IPR002048 GO:0005509
Dod10g1304 617 Gene3D - 475 616 - -
Dod10g1304 617 Gene3D - 86 441 - -
Dod10g1304 617 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 91 617 - -
Dod10g1304 617 Pfam Pyridine nucleotide-disulphide oxidoreductase 96 418 IPR023753 GO:0016491
Dod10g1304 617 ProSiteProfiles EF-hand calcium-binding domain profile. 418 453 IPR002048 GO:0005509
Dod10g1304 617 SUPERFAMILY FAD/NAD(P)-binding domain 95 314 IPR036188 -
Dod10g1304 617 SUPERFAMILY EF-hand 376 504 IPR011992 -
Dod10g1304 617 ProSitePatterns EF-hand calcium-binding domain. 431 443 IPR018247 -
Dod10g1304 617 PANTHER NADH DEHYDROGENASE 91 617 IPR045024 GO:0003954|GO:0006116
Dod10g1304 617 SUPERFAMILY FAD/NAD(P)-binding domain 262 416 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1304 Dod-Chr10 32938975 32945501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1304 43 617 Chloroplast and Mitochondria Gene Families AT4G21490 65.292 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1304 K03885 - gmx:100793566 951.814