Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1286 ATGGGGTGTTGTGTCTCAACAAGCAGTAGGAGTACTTGTAGTAGCAGGAGCAATGGAGACAGAGTCTCTCCATCTTGTCTAGAAATTGGATTCTGTGGTCAAAAGAGAACAAAGAGAGCATTCTCTGATCATGTTATCTCTTTGCATCAGTTAACATCCCTACCCAACAGAATTTTCACTAATGGAAAGAGCCGGTCTTCTTGCATATTTACGCAGCAGGGTCGTAAGGGTGTTAATCAGGATGCCATGCTTGTATGGGAAGATTTCATGTCAGAAGATGTGACCTTTTGTGGTGTCTTTGATGGCCATGGTCCTCATGGTCACCTTGTTGCACGCAAAGTTCGGGATGCCTTGCCGGTAAAACTGCTTTCTTATTTGCATCCTTGTGAATCGAGTCAAAATGGGCCGGGTCAAGCTTGTTTCAAAGGGAACATAAAGCCCGAGAGTGGAGAGCCTGAGAAGGATTGCTCTGATGAGGATAAACTGACTTCTATGTGGAGAGAAGCTTTCTTGAAGGCATACAAGGCTATGGACAAGGAGCTGAGATCTCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTAACTATAGTGAAGCAGGGATCAAGTCTATTCATGAGCAACATTGGGGATTCCCGAGCAATCATGGGATCCAGGGACAGCAATGACTCCATGGTGGCAATTCAATTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATTAAACGGTGTAAGGGTAGGGTATTTGCTTTGCAAGATGAGCCCGAAGTTCCTAGGGTATGGTTGCCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGACTTCTGCTTGAAGGAGTATGGTGTTATTTCTATACCTGAATTTTCTCACCGACTTCTTACAGACAAAGATGAGTTCATTGTACTTGCCTCAGATGGGGTCTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCTTCAGCACCAACTCGAGCATCAGCAGCGAGGATTCTGGTGGATTCTGCGGCCCGAGAGTGGAAACTTAAATATCCGACTTCAAAGATGGATGATTGTGCTGTTGTGTGCTTATTTTTGGATGGGAAGATGGACTCAGAATCTGATTGTGATGAGCAATGCTTTTCTTCTGCAACTATCCTAAGCAACCATTCGGGTAATCCGGTTGAGTCAGATGATGGTCAAAAGTCTGAGCCATCTTTGCAAAGGAACTTTACTGTGAGATCCTCAGAAGAAAATGAGACATATGGAGGAATAGCTGTTGATGTTGAGGATGGAACAACATCAGCTGAAGATCAAAACTGGTCAGGTCTGGAGGGTGTCACCCGAGTAAACTCGCTAGTCCAACTTCCTAGATTTTCTGAGGAAAGACCAACCTCTTGA 1413 0.4459 MGCCVSTSSRSTCSSRSNGDRVSPSCLEIGFCGQKRTKRAFSDHVISLHQLTSLPNRIFTNGKSRSSCIFTQQGRKGVNQDAMLVWEDFMSEDVTFCGVFDGHGPHGHLVARKVRDALPVKLLSYLHPCESSQNGPGQACFKGNIKPESGEPEKDCSDEDKLTSMWREAFLKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSSLFMSNIGDSRAIMGSRDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDEFIVLASDGVWDVLSNEEVVEIVSSAPTRASAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEQCFSSATILSNHSGNPVESDDGQKSEPSLQRNFTVRSSEENETYGGIAVDVEDGTTSAEDQNWSGLEGVTRVNSLVQLPRFSEERPTS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1286 470 Pfam Protein phosphatase 2C 159 344 IPR001932 -
Dod10g1286 470 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Dod10g1286 470 PANTHER ALPHABET, ISOFORM E-RELATED 1 458 - -
Dod10g1286 470 MobiDBLite consensus disorder prediction 391 447 - -
Dod10g1286 470 CDD PP2Cc 65 370 IPR001932 -
Dod10g1286 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Dod10g1286 470 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 458 - -
Dod10g1286 470 MobiDBLite consensus disorder prediction 391 423 - -
Dod10g1286 470 MobiDBLite consensus disorder prediction 1 22 - -
Dod10g1286 470 SMART PP2C_4 55 368 IPR001932 -
Dod10g1286 470 Gene3D - 59 378 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1286 Dod-Chr10 32751221 32755940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1286 1 470 PP2C-type Phosphatase Gene Family AT1G03590 70.711 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1286 - - gmx:100798340 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1286 10 32751221 32755940 Dod10g1286 10 32751221 32755940 ECH
Dod10g1286 10 32751221 32755940 Dod03g2147 03 50673349 50675946 PCT