Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1281 ATGGAGACTGTTATTTCCAACCACTCACCACCAACTGGCTTCAAGGGTTTGAAGGACAAGGAGGAGGAGGAATCACTGCTTGGGCAAGCTGAGATATGGAAATACATGACATGCTTCACTGACTCAGTGGCCTTGAAGTGTGCCGTGGAGCTTCGCATAGCTGACATCATAGACCGCTATGGCCAACCACTTTCCCTATCAAAAATCATAGAAAACATCGAAGATGCACCTTCCCCTGACCCTTCCTTGCTCCACCGTGTCATGAGAGTGCTTGTCCGAAAAAAGATCTTCTCTGCCGAGAAATCACCAGAGAATGGAGAGACCCTTTATGGCTTGACACGTGCATCTAAGTGGATCCTTCGTGACACAAAGATGACACTTGCACCAATGTTGTTGCTGGAGAACCACCCTATGCACTTGAACCCAGCACACTTCATCAGCGACATCATAAGGGAAGGAACTGAGAAGGGCACTGCTTTTTTCAGGTGCCATGGTCATGAGCAATTTGATTTAACTGGTTTGGACCCTGAGTACAACAGGTTGTTCAATGAGGGCATGGTGTGCACTGCTAGGACCGTGTCCAAGGCTGTTATATCTGGCTACCAAGAAGGCTTCAGCAAGATTCAGTCCTTGGTTGATGTTGGTGGTGGCATTGGAGGGTCACTCTCTGAGATTGTTAGAGCCTACCCGCATATCAAAGGTATTAACTTCGACTTGCCCCATGTTGTTGCCACCGCACCTAACTACGATGGAATCACACATGTTGGAGGTGACATGTTTGTGTCCATTCCTAAGGCTGATGCTGTTTACATGAAGTGGATTCTGCATGACTGGAGTGACAAACACTGCGTGAAGATTTTGAAGAACTGCAGGAAGGCAATACCAGAGACAGGGAAGGTGATAATTGTGGACCATGTTCTGCAGCCAGACGGGAACGGGCTATTTGATGACACTGGCTTTGCATTTGACATGATGCTGCTTGCACACAACGCTGGAGGGAAAGAGAGGACTGAGGAGAATTGGAAGTGGCTCTTTGCAGAAACTGGATTCCCTCGTTACAACATCATCAAGATCAATGCCCTTCCATCCATCATTGAGGCCTTCCCAATATGA 1113 0.4771 METVISNHSPPTGFKGLKDKEEEESLLGQAEIWKYMTCFTDSVALKCAVELRIADIIDRYGQPLSLSKIIENIEDAPSPDPSLLHRVMRVLVRKKIFSAEKSPENGETLYGLTRASKWILRDTKMTLAPMLLLENHPMHLNPAHFISDIIREGTEKGTAFFRCHGHEQFDLTGLDPEYNRLFNEGMVCTARTVSKAVISGYQEGFSKIQSLVDVGGGIGGSLSEIVRAYPHIKGINFDLPHVVATAPNYDGITHVGGDMFVSIPKADAVYMKWILHDWSDKHCVKILKNCRKAIPETGKVIIVDHVLQPDGNGLFDDTGFAFDMMLLAHNAGGKERTEENWKWLFAETGFPRYNIIKINALPSIIEAFPI* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1281 370 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 20 369 - -
Dod10g1281 370 Gene3D Vaccinia Virus protein VP39 121 370 IPR029063 -
Dod10g1281 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 369 IPR016461 GO:0008168
Dod10g1281 370 Gene3D - 15 119 IPR036388 -
Dod10g1281 370 PANTHER O-METHYLTRANSFERASE 20 369 IPR016461 GO:0008168
Dod10g1281 370 SUPERFAMILY "Winged helix" DNA-binding domain 22 122 IPR036390 -
Dod10g1281 370 Pfam O-methyltransferase domain 147 350 IPR001077 GO:0008171
Dod10g1281 370 PIRSF O-mtase 14 370 IPR016461 GO:0008168
Dod10g1281 370 Pfam Dimerisation domain 44 92 IPR012967 GO:0046983
Dod10g1281 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 367 IPR029063 -
Dod10g1281 370 CDD AdoMet_MTases 211 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1281 Dod-Chr10 32688198 32693173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1281 43 356 Monolignol Biosynthesis Gene Families AT5G54160 39.688 2.84e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1281 K22588 - gmx:100800801 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1281 10 32688198 32693173 Dod10g1281 10 32688198 32693173 ECH