Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1277 ATGGATGAAGCTAAGAACATTGGCAAATTCAGCAACAAGGGTGTGGATGAAAGCCAAGACTTGAAGGGTATTATTGAAAAGAGAGAAGAAAAGGGTGTTGTTGATCTAAGCTTTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGACGCTTCCATGCCATATAAGAGGCCTCTCAAGAAGATTCGTAGCCCTGAACGTTCTTCTTCTTCTTCCCTTCAGTTTCATCAACAACCTCTTAACTCTCCTCCTTCTTCTTCTGTTCCTCCTTCATCTTCGACAACACCACCTTCATCCTCTTCAAGGATCATGTTCCCTTTTGCAATTGATGGCTCTCAACACCCCATGCAAATGCACCAGTTTCATCACCAATATGGAACAACCACCACAAACTTGCCTTTTTTGCCTCCTTCTCTTCACCCAACAACACAAAGCCAACATCATCATCAACAACAACACATGATATCTTTCGGTTCACATCCCCAACAACAACAACAACAACACCACAACATAGTGTATCCGCAAATGCTACAACTCCAACAACAACAGCATAACCAGCAGCTTCTTCAGTATTGGAGTGAGGCATTGAATTTAAGTCCAAGAGGGAGAATGATGATGATGAACAGATTGGGACCAGATGGTAGACCATTGTTGAGGCCGCCAACAACACAGCCATTAAACACTACAAAGCTCTATAGGGGTGTGAGGCAACGCCATTGGGGGAAATGGGTCGCTGAGATTCGCTTACCTCGCAACAGGACTCGCCTCTGGCTTGGCACATTTGACACTGCAGAAGATGCTGCCATGGCCTATGACCGTGAGGCCTTCAAGCTTAGAGGGGAGAATGCAAGGCTCAATTTCCCTGAACTCTTTCTCAACAAGGATAAAGCACCTTCTAATAATGCTCCTAGTCCTACTACGTCATCTGCATCTTCTAATATCACAACAACAACAGCAGCAACAACAAAGGAGCCTGAAGCGGTTCCTGAAGGTAATAATGTGCATGTGGAGCAAGGTACAATAGAAGAGACTAATGAGAATGACTCAGGAATAGGGTCAAGTGATGCCACTGTGAGTGAAGGTGGGGAAGGTGGTGGCCGTGGAGAAGGGGTTTCACAGTCTCAGGAACTTGTTTGGGGTGAAATGTCTGCATGGTTCAATGCTATTCCTGCAGGTTGGGGTCCAGGTAGCCCTGTGTGGGATGATTTGGACACCACCAATAATCTTCTCTTGCAATCACAGATTCCATTTGTAAACCCAAATCAGCAACAACATGAATCCAATGATGATTCTGATGCTCAGAGGCAAGAAAATCATCATCATAACACCGGACCAGGTCCTTCCACTTCATCTTTTAGGCCTTTCTTCTGGAAGGATCAGGATTGA 1383 0.4519 MDEAKNIGKFSNKGVDESQDLKGIIEKREEKGVVDLSFQRRQWKPVFDDASMPYKRPLKKIRSPERSSSSSLQFHQQPLNSPPSSSVPPSSSTTPPSSSSRIMFPFAIDGSQHPMQMHQFHHQYGTTTTNLPFLPPSLHPTTQSQHHHQQQHMISFGSHPQQQQQQHHNIVYPQMLQLQQQQHNQQLLQYWSEALNLSPRGRMMMMNRLGPDGRPLLRPPTTQPLNTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKDKAPSNNAPSPTTSSASSNITTTTAATTKEPEAVPEGNNVHVEQGTIEETNENDSGIGSSDATVSEGGEGGGRGEGVSQSQELVWGEMSAWFNAIPAGWGPGSPVWDDLDTTNNLLLQSQIPFVNPNQQQHESNDDSDAQRQENHHHNTGPGPSTSSFRPFFWKDQD* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1277 460 SUPERFAMILY DNA-binding domain 230 288 IPR016177 GO:0003677
Dod10g1277 460 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 457 - -
Dod10g1277 460 SMART rav1_2 230 293 IPR001471 GO:0003700|GO:0006355
Dod10g1277 460 MobiDBLite consensus disorder prediction 292 371 - -
Dod10g1277 460 MobiDBLite consensus disorder prediction 126 149 - -
Dod10g1277 460 MobiDBLite consensus disorder prediction 417 460 - -
Dod10g1277 460 MobiDBLite consensus disorder prediction 336 355 - -
Dod10g1277 460 Pfam AP2 domain 231 279 IPR001471 GO:0003700|GO:0006355
Dod10g1277 460 MobiDBLite consensus disorder prediction 64 81 - -
Dod10g1277 460 MobiDBLite consensus disorder prediction 1 21 - -
Dod10g1277 460 Gene3D AP2/ERF domain 230 288 IPR036955 GO:0003700|GO:0006355
Dod10g1277 460 MobiDBLite consensus disorder prediction 439 460 - -
Dod10g1277 460 MobiDBLite consensus disorder prediction 48 103 - -
Dod10g1277 460 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 4 457 - -
Dod10g1277 460 CDD AP2 229 289 IPR001471 GO:0003700|GO:0006355
Dod10g1277 460 ProSiteProfiles AP2/ERF domain profile. 230 287 IPR001471 GO:0003700|GO:0006355
Dod10g1277 460 MobiDBLite consensus disorder prediction 296 322 - -
Dod10g1277 460 PRINTS Ethylene responsive element binding protein signature 231 242 IPR001471 GO:0003700|GO:0006355
Dod10g1277 460 PRINTS Ethylene responsive element binding protein signature 253 269 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1277 Dod-Chr10 32631207 32633815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1277 191 401 AP2-EREBP Transcription Factor Family AT2G20880 53.774 1.67e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod10g1277 AP2 3.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1277 - - gmx:100809887 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1277 10 32631207 32633815 Dod10g1277 10 32631207 32633815 ECH