Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1261 ATGGAGCCTCTGCTTGTAGGCGAAGGCAGTAGTGGCCGGAGCGAGCGGCCGCGGGGGATATTCCGCCGCACCGACGCCATCTCCTACGGCTCCAACTACGAGAAAGCTGCTGCACTTGTCGATCTGGCTGAAGATGGTGTTGGTCTCCCTGAACAAATCCTCGATTCATCAAGCTTTCAAAGTTCGTCAAGATTTTATTTTACTTTCACTAAAGTCAATGTCATCTGGTCACTTGGTTATGTTGCTTTGTTAGTCCTGAATTTCCTGGAGGAACCACTATGGTGTAAAAATTATACCACACATTCTTGCAGTGATAGAGAGTATTTCTTTTTGGGACAATTGCCCTATCTAACTGCAGCAGAATGTCTTGTTTATGAGGGATTAGCTCTTGTTGTGATAATCATACATACTTTCTTCCCAATATCATACGAAGGGTCCCATATCTATTGGAAAAATGCTATTAATCTGTTGAAGGTCTTCTGTCTATTAGTCCTTGTAGCTGATATGGTGGTTTATGCTATTTATTTGTCTCCAGCTGCTTTTAATTCCCTACCTTTCAGAGTTGCACCTTATATCAGGGTTATTCTTTTCATTCTGAATATTAGGGAGCTACGAGAAACCATCATCATCTTGAGTGGAATGCTGGGCACATACTTAAATGTCTTGGCTTTGGGGCTTCTGTTTCTTCTTTTTGCAAGTTGGGTCGCTTATGTGATGTTTGAAGATACAATACAGGGAAAAACAGTATTTAATTCTTATGGTACTACGTTGTATCAGCTATTTGTTTTATTTACCACATCCAATAATCCGGATGTTTGGGTTCCTGCATACAAGGTTTCGCGTTGGTATTGCCTCTATTTTATTCTGTTTGTGCTCTTGGGGGTTTACTTTGTGACAAACTTGGTCCTTGCTGTTGTTTATGATAGTTTCAAGAGTGAGCTTGTAAAACAAGTTTCCGAGACGGATCAGATGAAAAGAAGAATGTTGGAGAAAGCTTTCAATATCTTAGATGCACATAATGTTGGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAGGAGTTGAACAAGTACAGGACTTTGCCAAAGATCCCAAGGGAAGAGTTTGAGTTGATATTTGATGAACTCGATGATAGTCGAGATGTAAAGATCAACAAGGATGAATTTGCTGATATTTGCCATGCTATTGCTTTAAAATTCCAGAAGGAGGATACTCTATCTTACTTTGAGTATTTAGCATTCTACCATTCATCCACCTCAAAGAAATTGAAAGCATTTGTGAAGAGCCCCATGTTTGGTTACCTAATCTCCTTCATTCTTGTACTCAACCTGGTTGCTGTTATTATTGAGACAACGCTTGATATACAAAACAATTCTGCTCAAAAGGTGTGGCAAGTGGTTGAGTTCGTTTTCGGGTGGATATATGTAATCGAAATGGCTTTAAAGGTTTATTCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAATCGCTTTGATTTTATCATCACATGGATAATTGTCATTGGAGAGACTATAACTTTTGCTACGCCTGATGATCAGTCCTTCTTCTCAAATGGAGAATGGATTCGTTACCTTCTTCTGGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGTATGTCCAGCGATTCCGAGGCTTTGTTGCAACTTTCTTAACTCTTATACCAAGTTTGATGCCATACTTTGGGACCATATTTTGTGTCTTATGCATTTATTGCTCAGTTGGTGTACAGATTTTTGGTGGACTTGTTAATGCTGGAAACCCCCAATTGGAAGCAACAGATCTTGCTGATAATGACTATTTGCTTTTTAACTTCAACGATTATCCTAATGGAATGGTGACACTTTTCAATTTAGTAGTCATGGGGAACTGGCAAATATGGATGCAGAGCTACAAGGAATTAACTGGGACATCTTGGTCTTATGTATACTTCATTAGCTTCTACTTAATCACTGTTTTGCTGCTTTTGAACTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTCGAGTCAGGTTCCTATGGTGAACGTGACGAGGAGGTTTGTGTTTAA 2091 0.395 MEPLLVGEGSSGRSERPRGIFRRTDAISYGSNYEKAAALVDLAEDGVGLPEQILDSSSFQSSSRFYFTFTKVNVIWSLGYVALLVLNFLEEPLWCKNYTTHSCSDREYFFLGQLPYLTAAECLVYEGLALVVIIIHTFFPISYEGSHIYWKNAINLLKVFCLLVLVADMVVYAIYLSPAAFNSLPFRVAPYIRVILFILNIRELRETIIILSGMLGTYLNVLALGLLFLLFASWVAYVMFEDTIQGKTVFNSYGTTLYQLFVLFTTSNNPDVWVPAYKVSRWYCLYFILFVLLGVYFVTNLVLAVVYDSFKSELVKQVSETDQMKRRMLEKAFNILDAHNVGYLNKDQCIRLFEELNKYRTLPKIPREEFELIFDELDDSRDVKINKDEFADICHAIALKFQKEDTLSYFEYLAFYHSSTSKKLKAFVKSPMFGYLISFILVLNLVAVIIETTLDIQNNSAQKVWQVVEFVFGWIYVIEMALKVYSYGFENYWRDGQNRFDFIITWIIVIGETITFATPDDQSFFSNGEWIRYLLLARMLRLIRLLMYVQRFRGFVATFLTLIPSLMPYFGTIFCVLCIYCSVGVQIFGGLVNAGNPQLEATDLADNDYLLFNFNDYPNGMVTLFNLVVMGNWQIWMQSYKELTGTSWSYVYFISFYLITVLLLLNLVVAFVLEAFFAEMELESGSYGERDEEVCV* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1261 696 CDD EFh 328 393 IPR002048 GO:0005509
Dod10g1261 696 Gene3D - 422 555 IPR027359 -
Dod10g1261 696 SUPERFAMILY Voltage-gated potassium channels 430 676 - -
Dod10g1261 696 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 3 687 IPR044581 GO:0005245
Dod10g1261 696 Gene3D - 311 394 - -
Dod10g1261 696 Gene3D - 203 310 - -
Dod10g1261 696 Gene3D - 556 694 - -
Dod10g1261 696 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Dod10g1261 696 SUPERFAMILY EF-hand 320 411 IPR011992 -
Dod10g1261 696 Pfam Ion transport protein 132 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod10g1261 696 Pfam Ion transport protein 431 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1261 Dod-Chr10 32463426 32485126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1261 1 695 Ion Channels AT4G03560 68.534 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1261 K16900 - gmx:100806160 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1261 10 32463426 32485126 Dod10g1261 10 32463426 32485126 ECH