Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1257 ATGGGTTGCATAACATCAAAGAGTTCAGCTGTGGATGACAGCAAGGAAGGTTTGACAAGGAAATTGACATCATCCAGCAAAAGGACTATGTCAGATCATAAGAATGTTTCACGGTTAAATTCCTCTAAAAGGGTTGGTGGTGGTGTTGATATGAGAGTTTCATGGATTGATAAGAAAGCCAGTGGTTCAGTGAAGTTGCATGCTGATGATGATGATGATCAGAATGAGCAGAGGAAGAAGAAAATGGAGGGACCTGAATTGAGTGTTGTTGATCATCATCATCCTGGTCTTGGAAGGGTTCCAAAGGCTTCAGAAGGAGAGCAAGTTGCAGCAGGGTGGCCCACTTGGCTTTCTTCTGTTGCTGGCGAAGCTATCAAGGGGTGGATACCTCGGAGTGCAAATACTTTCGAGAAGTTTCATAAAATTGGCCAAGGAACTTACAGTACTGTTTATAAAGCACGTGATGTCACTCACCAAAAGATCGTTGCATTGAAGAGGGTACGCTTTGATAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATTCTTGTCCTGCGCAGGCTTGACCATCCAAATGTAATAAAGTTGGAGGGCTTGATAACATCGCAGTCGTCTCGCAGCTTGTACCTTGTTTTCGAATATATGGAACATGATCTTACTGGACTTGCATCAAGTCCTGGCATGAAGTTTTCTGAACCACAGGTTAAGTGCTACATGCAGCAGCTTCTAAGTGGACTGGATCATTGTCATAGTCGTGGTGTCCTCCATCGGGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGGATCTTAAAGATTGCAGATTTTGGCTTGGCAAATTTTATAGACCCCCATCACAGTGTTCCATTGACCAGCCGTGTAGTAACACTGTGGTATAGACCACCAGAACTTTTACTTGGAGCATCTCGTTATGGAGTTGCAGTGGATTTGTGGAGCACTGGTTGCATACTGGGGGAATTACATTCTGGCAGGCCCATTTTGCCTGGAAAAACAGAGGTTGAGCAATTACATAGGATTTTCAAACTTTGTGGCTCACCATCTGAGGACTATTGGCGTAAATTGCGGTTGCCACATTCAACAGTATTCAGGCCTCCGCACCATTATAGGCGATGTGTTGCAGAAACATTTAAGGAATGTCCATCTGCAGCTGTGAGGCTTATAGAGACCCTACTTTCTGTAGATCCTGCACGGCGAGGAACAGCAGCTTCTGCTCTGAAGAGTGATTTCTTTTCATTGGAACCCCGTGCTTGTGATCCATCAAGTTTACCAAAATATCCTCCTAGCAAAGAGATTGACACTAAAATGCGGGATGAAGCAACAAGAAGGCGAGGAGCTTCTGGGAGAAAGGACCAAAAGGAGAAAGTACCTCGGACCTTTGTCTCATCAAAAGGCAAAGTTGACTCACGCATACCAATGCAGCAACAGCCACATCTGTCGAACTCAAATAGCCGGAGTGGATTGTTAAACTCTCATGGAGAACCTGTGTCTGGATATTTTGTTTTTCAACACAGGCAGTCAGATGATGCTAAAGAAGTGGAAAATTATTTCTCTGGACCTCTCTACAGGAAGCCTTCACATTCAGGTCCATTGGTTCCAGTTTTTGCCTGGGAAAAGGCTGCAAAGGAAGCTGGTGAGCAGCCTCCTATTTCAAACAAAGCCAGTCTATCAAAACTATCTGGGTTAGTGGCATCTAGGACTTCATTGCCTGAAGATCAGGAAGAAAAACCAGTTCCCTTGAAGCCTAGAAAAACAAGTCAAGTGCAACAATCTTTTGTTTCAACTAATGGAGCCGAACCAAGAAGGCGGAGGAATGATAAATTGCGCTTGTCTCAGAGAATCGATCTCAGTCAATTAGAAGAAGGAAAAGTCCCCACTGAAAATTTAGTTCAGGATGGATCCAGGGGAAATAAGATCTATCTCTCTGGTCCCTTAATGGTTTCATCAAACAATGTGGATAAGATCCTCAAAGAGCATGATAGAAAGATCCAGGAATTTTCAAGACGAGCACGAATTGACAAGTCTAAATGTGAGAAAGGTCACGCATGGTGA 2079 0.4367 MGCITSKSSAVDDSKEGLTRKLTSSSKRTMSDHKNVSRLNSSKRVGGGVDMRVSWIDKKASGSVKLHADDDDDQNEQRKKKMEGPELSVVDHHHPGLGRVPKASEGEQVAAGWPTWLSSVAGEAIKGWIPRSANTFEKFHKIGQGTYSTVYKARDVTHQKIVALKRVRFDNLDPESVKFMAREILVLRRLDHPNVIKLEGLITSQSSRSLYLVFEYMEHDLTGLASSPGMKFSEPQVKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLANFIDPHHSVPLTSRVVTLWYRPPELLLGASRYGVAVDLWSTGCILGELHSGRPILPGKTEVEQLHRIFKLCGSPSEDYWRKLRLPHSTVFRPPHHYRRCVAETFKECPSAAVRLIETLLSVDPARRGTAASALKSDFFSLEPRACDPSSLPKYPPSKEIDTKMRDEATRRRGASGRKDQKEKVPRTFVSSKGKVDSRIPMQQQPHLSNSNSRSGLLNSHGEPVSGYFVFQHRQSDDAKEVENYFSGPLYRKPSHSGPLVPVFAWEKAAKEAGEQPPISNKASLSKLSGLVASRTSLPEDQEEKPVPLKPRKTSQVQQSFVSTNGAEPRRRRNDKLRLSQRIDLSQLEEGKVPTENLVQDGSRGNKIYLSGPLMVSSNNVDKILKEHDRKIQEFSRRARIDKSKCEKGHAW* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1257 692 PANTHER CYCLIN-DEPENDENT KINASE 2 682 - -
Dod10g1257 692 CDD STKc_CDK9_like 136 420 - -
Dod10g1257 692 ProSiteProfiles Protein kinase domain profile. 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1257 692 MobiDBLite consensus disorder prediction 592 607 - -
Dod10g1257 692 MobiDBLite consensus disorder prediction 439 470 - -
Dod10g1257 692 Gene3D Transferase(Phosphotransferase) domain 1 219 459 - -
Dod10g1257 692 SMART serkin_6 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1257 692 MobiDBLite consensus disorder prediction 575 615 - -
Dod10g1257 692 Gene3D Phosphorylase Kinase; domain 1 123 218 - -
Dod10g1257 692 Pfam Protein kinase domain 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1257 692 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524
Dod10g1257 692 MobiDBLite consensus disorder prediction 477 499 - -
Dod10g1257 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Dod10g1257 692 MobiDBLite consensus disorder prediction 1 106 - -
Dod10g1257 692 MobiDBLite consensus disorder prediction 426 499 - -
Dod10g1257 692 PANTHER CELL DIVISION PROTEIN KINASE 2 682 - -
Dod10g1257 692 SUPERFAMILY Protein kinase-like (PK-like) 130 421 IPR011009 -
Dod10g1257 692 MobiDBLite consensus disorder prediction 62 100 - -
Dod10g1257 692 MobiDBLite consensus disorder prediction 13 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1257 Dod-Chr10 32432358 32437287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1257 128 466 Core Cell Cycle Gene Families AT5G10270 47.887 4.03e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod10g1257 Pkinase 5.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1257 - K08819 gmx:100775462 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1257 10 32432358 32437287 Dod03g2112 03 49988163 49995154 PCT