Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1255 ATGAGATGTATGTGGGGTTTTCTGGGGCAACTGGGAGAATGGTGGATATGTGTAGAATCTTGGCTTGGAGTTTCAGCAATTCAAATTTTTCAATTGGTGATGCTTTTGCAGACCAAACATTTGCCCTTGTTTGTGCATCCAAGGGCATTGGTGTATAGATCAAAAGCTTTCATTGTTGGTGTCATGTTTGGCGCACTGTTTGTTAGTGCCTGCTGCACTTTGGTGTTCATCAGCTTATCAAGAACCAGAAGAAGGAAAGAGAAAGATAAAAAATTTGAAGATTGGGAGTTGGAGTATTGGCCACATAGGATTAGCTATGAAGAGATTTGTAGAGCAACAAACGGATTCTCCGAAGAGAAAGTGATTGGGAAGGGAACAAGTGGGAAAGTGTACAAGGGGGTCCTGAAAGGAGTGGAAGTGGCAGTGAAGAAATTCGATCATGACACCCAGCATGAGATGAGAGAGTTTCTGGCAGAGATCTCAAGCCTAGGAAGAATGAAACAGAGAAACTTGGTGGGTTTCAGAGGTTGGAGTAAAAGAAAAGGAGGAAAATTGATCCTGGTTTATGATTACATGGGGAATGAAAGCTTGGACAAGAGGATTTTTGAGTGTGATGATACCATGTTATTGAGCTGGGAACTGAGAATTAATGTACTACAAAACGTAGCTAGTGGAATTTTGTACCTACATGAGGGTTGGGAAGTTGAGGTCTTGCATAGAGACATCAAATCAAGTAATGTGCTACTTGACAAGGACATGAATGCTAGATTGGGAGATTTTGGGCTAGCCAGGCTGCATCAAAAGGAACATGTGGTTGACACAACAAGAGTAATAGGGACTCTGGGGTACATGGCCCCAGAACTAGTCCGAATCGGTCAACCATTCAACTGCAACTGA 897 0.4259 MRCMWGFLGQLGEWWICVESWLGVSAIQIFQLVMLLQTKHLPLFVHPRALVYRSKAFIVGVMFGALFVSACCTLVFISLSRTRRRKEKDKKFEDWELEYWPHRISYEEICRATNGFSEEKVIGKGTSGKVYKGVLKGVEVAVKKFDHDTQHEMREFLAEISSLGRMKQRNLVGFRGWSKRKGGKLILVYDYMGNESLDKRIFECDDTMLLSWELRINVLQNVASGILYLHEGWEVEVLHRDIKSSNVLLDKDMNARLGDFGLARLHQKEHVVDTTRVIGTLGYMAPELVRIGQPFNCN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1255 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Dod10g1255 298 PANTHER - 30 293 - -
Dod10g1255 298 ProSiteProfiles Protein kinase domain profile. 116 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1255 298 SMART serkin_6 116 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1255 298 Pfam Protein kinase domain 117 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1255 298 Gene3D Transferase(Phosphotransferase) domain 1 192 297 - -
Dod10g1255 298 SUPERFAMILY Protein kinase-like (PK-like) 92 292 IPR011009 -
Dod10g1255 298 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Dod10g1255 298 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 30 293 - -
Dod10g1255 298 Gene3D Phosphorylase Kinase; domain 1 76 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1255 Dod-Chr10 32425950 32426846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1255 38 293 Receptor kinase-like Gene Family AT4G04960 56.538 3.26e-88 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod10g1255 Pkinase 7.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1255 - - vra:106754182 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2111 03 49983132 49985868 Dod10g1255 10 32425950 32426846 PCT