Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1249 ATGGGCTTGTTTTCACCAGGTAACACTGGTAACTACTACTTGGGCATATGGTACAAGGCTCTTCCACTACCAGAAAAAACAGTGGTTTGGGTAGCCAATAGGGACCAACCTTTCTCTGAACCAAACTCTTCGTTCTTGGAGTTTTCCCATGATGGCAACTTAGCCCTTAACACTTCAAATGGACAAATTTGGTGCACAAATTTGACCACCGTCACGCCTCATTCATTTGGTGTACTTGGCGACGATGGAAATTTCATTATATACAGTGATCCCTCTTCTTACAAAGTAGTATGGCAGAGTTTTGATCATCCAAGTGATACATGGCTGCCGGGGGCTCAATTTCGATATGGTAGTGTGCTCAGATCATGGAAAGATAAGCATAACCCAGCACCAGGGCTCTCCTATGCTGAGGTAGATATTCCAGCTCAAATGTTGTTAAGGAATGGCTCCACATCCTATTGGATTGATCCCAATGAATTTGAAACCAAACACACTACAGTGGAATACTTTCCAGTGAATTCCTCATATGGTTTCTTTAAGTATTCGGTGGTGTATTCATCTGGTCTAGTTAGATATGTGCTGGACGTGGATGGCCATCTCAAGCAGTTTGTATGGTGGGACGATTTCCATAGATGGAACTTGATTTGGAGACTACCACCCCATAAATGTGATTCTGCATGTGGTGATTTTAGCATATGCGATGGTGAGAGTCTGCCTAACTGTCGTTGCATGAAAGGGTTCAAACCCAAAATACTAAAGTATTGGAACATGGGGGTTTACACTAACGGATGTGTTAGGGATGATGATCTTATGCTGTGTGATGACAGCAGACCAGACACATTCTTTCTTTTACACAATACACGCTATCCACATAGCCCGGAATCTTTTGCCGTGGAGAGTTCCAGTGAGTGCCTCTTGGAATGCTTAGAAAACTGTTACTGTTCTGCTCATGCGTATTATGGCAACAGATGCCTCATTTGGACGGACACGGGCTCAATGGAAACGTTGAGGGAAGTTTCATCGGATGAGGAGATTGGAGGAGATTTGTATGTCCGAGTTGCAGCACTCAAGAGGAAGAAGGGACATAAGTTGCCTTTGAATTGGATTCTTCTGGCATTAGCAGCAGGCATTGCTTGCCTCTTTGGCATTATTATTGTGCTGGACACAAGAAGGAGGAAAGAGCCTAGTGGTGGTAGCTCTTCTGAGGCAACAGGCCATACAGTAATGCGTTTCAAGCACCAAATCTTGCGAAAGGCAACAAAAAATTTCGCAAAGAAACTTGGGCGGGGTGGTTTTGGCACTGTTTATAAAGGGAAATTGCCCGATTCAACTTTCATTGCAGTAAAGGAACTTAGTGGCCTAATGCAGAGAGAGAAGCAGTTTAGAGCAGAACTGAGCACAATTGGAGTAATCCAGCACAAAAATCTTGTCAGGATATGTGGCTATTGTGTACATGATTCAAAGAAGTTCATAGTTTATGAATATGTACCAAATGGTTCTTTAGAATCTCTTCTTTTCCACAGGGATTCTAATGTGTTGGATTGGGAAAGACGATACAATATTGCTCTTGGGACTGCCAAAGGTTTGGCCTACCTACACGAGGAGTGTAGAGACTGCATCATACACTGTGACATCAAGCCAGAGAACATTTTGTTGGATGCAGATTATAACCCCAAAGTTGCTGATTTTGGCCTTGCAAAGATTTTGAGCCGAAACTTCAGCCGGGTTCTTACCACCATGAGGGGAACTAGAGGATATCTGGCACCAGAATGGTTTTCAGGTGAAGCTGTCACGGCAAAGGTTGATGTATACAGTTATGGACAAGTACTTTTCGAGATTATTTCTGGTAGAAGAAACATGGACCTGTTAAATGATGAACTATGCAACTATTTTCCGGTACTTGTTTTCAACACATTGAAAAGTGGAGAAGTTCTGGTGCTCGCTGATCCCAAGTTAGATGGCAAAGTCAATATGGAAGAGCTAACAAGGGCTTGCAAGGCTGCATGTTGGTGCACTCAGGAGAATGAGAAAGATAGACCAACCATGAGACAGGTGGTTCAAATTTTGCAGGGAATTCTAGATGTAGGTGTCCCTTCAATTCCAAGGTTTCTCCAGTCCCTTGCAGAAACTTCTGTGCGAGAAACTGATATCAGGAGAAGTGAGGGTGACATTACATCAAGTTCACAGTCAACTAGTTTCACCTTTTGTGAACCTTCATTTTCAGCATACACAGGCGCCGCAATATGCTGA 2250 0.4324 MGLFSPGNTGNYYLGIWYKALPLPEKTVVWVANRDQPFSEPNSSFLEFSHDGNLALNTSNGQIWCTNLTTVTPHSFGVLGDDGNFIIYSDPSSYKVVWQSFDHPSDTWLPGAQFRYGSVLRSWKDKHNPAPGLSYAEVDIPAQMLLRNGSTSYWIDPNEFETKHTTVEYFPVNSSYGFFKYSVVYSSGLVRYVLDVDGHLKQFVWWDDFHRWNLIWRLPPHKCDSACGDFSICDGESLPNCRCMKGFKPKILKYWNMGVYTNGCVRDDDLMLCDDSRPDTFFLLHNTRYPHSPESFAVESSSECLLECLENCYCSAHAYYGNRCLIWTDTGSMETLREVSSDEEIGGDLYVRVAALKRKKGHKLPLNWILLALAAGIACLFGIIIVLDTRRRKEPSGGSSSEATGHTVMRFKHQILRKATKNFAKKLGRGGFGTVYKGKLPDSTFIAVKELSGLMQREKQFRAELSTIGVIQHKNLVRICGYCVHDSKKFIVYEYVPNGSLESLLFHRDSNVLDWERRYNIALGTAKGLAYLHEECRDCIIHCDIKPENILLDADYNPKVADFGLAKILSRNFSRVLTTMRGTRGYLAPEWFSGEAVTAKVDVYSYGQVLFEIISGRRNMDLLNDELCNYFPVLVFNTLKSGEVLVLADPKLDGKVNMEELTRACKAACWCTQENEKDRPTMRQVVQILQGILDVGVPSIPRFLQSLAETSVRETDIRRSEGDITSSSQSTSFTFCEPSFSAYTGAAIC* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1249 749 SUPERFAMILY Protein kinase-like (PK-like) 400 689 IPR011009 -
Dod10g1249 749 SUPERFAMILY alpha-D-mannose-specific plant lectins 11 106 IPR036426 -
Dod10g1249 749 CDD STKc_IRAK 427 692 - -
Dod10g1249 749 Pfam Protein kinase domain 424 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1249 749 SMART serkin_6 421 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1249 749 ProSiteProfiles PAN/Apple domain profile. 273 354 IPR003609 -
Dod10g1249 749 CDD PAN_AP_plant 273 354 - -
Dod10g1249 749 ProSitePatterns Protein kinases ATP-binding region signature. 427 449 IPR017441 GO:0005524
Dod10g1249 749 Gene3D Transferase(Phosphotransferase) domain 1 496 696 - -
Dod10g1249 749 Pfam D-mannose binding lectin 27 117 IPR001480 -
Dod10g1249 749 Pfam PAN-like domain 273 329 IPR003609 -
Dod10g1249 749 Pfam S-locus glycoprotein domain 161 250 IPR000858 GO:0048544
Dod10g1249 749 Gene3D - 1 101 IPR036426 -
Dod10g1249 749 CDD B_lectin 1 104 IPR001480 -
Dod10g1249 749 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 712 - -
Dod10g1249 749 ProSiteProfiles Bulb-type lectin domain profile. 1 100 IPR001480 -
Dod10g1249 749 SMART blect_4 1 104 IPR001480 -
Dod10g1249 749 PIRSF SRK 1 738 IPR024171 GO:0004674
Dod10g1249 749 SMART ntp_6 276 353 IPR003609 -
Dod10g1249 749 ProSiteProfiles Protein kinase domain profile. 421 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1249 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Dod10g1249 749 PANTHER KINASE, PUTATIVE-RELATED 1 712 - -
Dod10g1249 749 Gene3D Phosphorylase Kinase; domain 1 386 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1249 Dod-Chr10 32256594 32259024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1249 410 698 Receptor kinase-like Gene Family AT5G20050 41.368 2.74e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod10g1249 Pkinase 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1249 - - vvi:109121483 724.161