Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1245 ATGGGGTCTAATCATGGTTATCTAGGCCTTGTGCTTTTGATTTTAGCCATTTTGATTTCATCATCATCAGCATTCACATTCAACGTTGGTGGCAAAGATGGCTGGGCGGTCAAGCCTTCCGAAGACTACGGTCACTGGGCTCAGAGAAACAGGTTCCAAGTCAACGACACTCTCCATTTCAGTTACAAGAGAGGGACTGATTCAGTTTTGGTGGTGACAAAAGAAGACTACGATTCATGCAACACCAAGAGCCCCTTGCACAGGTTCAAGGGTGGGGGCTCAACCATCAAACTGCACAAGTCTGGTCCCTTTTTCTTCATCAGTGGAAACGTTGAGAACTGCAAGCAAGGCCAAAAGGTCATCGTTGTAGTCATGGCTGTTAGGCACCACAACGTTCCGTCACCTCCTCCATCTACACCACCATCAATAGCTCCCTCAACAACACCATCAAAGGCTCCTTCTAACCCACCATCCGCAGCACCAGCTCCTGATGTGTCTCCGCCGGCTGCACCACCTGCCGGTTTGAATGCTCCGGCACCGGTTCCGGCGAAAAATTCGGGTTCTAGAAAGTCTTTTGGTGCGGCTTTGGGAATTAGCTTTATGGTGGTGTTGTTCTTCAGCAGCTTTGTTTAG 633 0.4929 MGSNHGYLGLVLLILAILISSSSAFTFNVGGKDGWAVKPSEDYGHWAQRNRFQVNDTLHFSYKRGTDSVLVVTKEDYDSCNTKSPLHRFKGGGSTIKLHKSGPFFFISGNVENCKQGQKVIVVVMAVRHHNVPSPPPSTPPSIAPSTTPSKAPSNPPSAAPAPDVSPPAAPPAGLNAPAPVPAKNSGSRKSFGAALGISFMVVLFFSSFV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1245 210 CDD OsENODL1_like 25 125 IPR041846 -
Dod10g1245 210 PANTHER EARLY NODULIN-LIKE PROTEIN 2 13 146 - -
Dod10g1245 210 MobiDBLite consensus disorder prediction 133 178 - -
Dod10g1245 210 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Dod10g1245 210 Gene3D - 23 129 IPR008972 -
Dod10g1245 210 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Dod10g1245 210 PANTHER BLUE COPPER PROTEIN 13 146 IPR039391 GO:0009055
Dod10g1245 210 MobiDBLite consensus disorder prediction 132 188 - -
Dod10g1245 210 Pfam Plastocyanin-like domain 35 118 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1245 Dod-Chr10 32232965 32234070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1245 7 205 Phytocyanin Superfamily AT4G28365 42.211 3.90e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1245 - - lja:Lj3g3v2809780.1 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1245 10 32232965 32234070 Dod10g1245 10 32232965 32234070 ECH