Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1241 ATGGAGAGTCCCTCTGTAGAGGATGATGGGGACTGCTTCTCACCTTTATTGTTAAATACAACTTCTGTCGACATTGAGGTCTACTATAACAAAGCAGTGAACTATACCTTGATGGTTACTTTTATCTCTTTCTTGCAAGTTCTTCTATTGATTCGTCAAATGGAGCATAGTAGCACTCAATCTGGAGCTGCTAAGGTTTCAATATTAATGATTGGCCAGCAAGCAATAATGGATGCTTATCTTTGCCTTTTGCATCTGACTGCAGGAATATTAGTTGAATCCTTGTTTAATGCTTTTGCAACTGCAGCATTTTTCAAGTTTGTTGTCTTCTCAATATTCGAGATGAGATATCTCCTTGCCATCTGGAAGGCAAGTAGGCCTTTGAGTAGTGGGGAAGGTTGGGAGACAATGAGGCGTGAACTTTCAGTTTTGTATAGCCGTTTCTATGGAATCCTGTTGGGAGGCATTCTACTCATGTACGAGTTCCATCACTATTTGAGACCTATTTTTCTTCTCATGTACTCGTTTTGGATACCTCAGATAATCTCCAATGTTATTCGCGATTCACGCAAACCATTGCATCCTCATTATATCATAGGGGTAACTGTTACTCGGTTAGCAATCCCGTTATATATTTTTGGTTGCCCTAACAACTTCGTGCGCATAGAGCCAGACAAGAGCTGGTGTGTTTGGCTGACTGTATTTATTGGGCTTCAAGCTTCAATTCTTCTACTCCAGCATTACCTCGGGTCCCGCTGCTTCATTCCTCGCCAGATACTGCCTGAGAAGTACAGCTATTATAGGAGGTTTGATCAAGATGCGAGACAGGCTACAGACTGTGTGATTTGCATGACAGGCATTGATCTTACTCAGCGGTCTAATGACTGCATGGTGACACCTTGTGATCATTTCTTTCACTCTGGCTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGCCCGACTTGCCGGCGCCCTTTACCGACTGCCTAG 993 0.428 MESPSVEDDGDCFSPLLLNTTSVDIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSSTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSSGEGWETMRRELSVLYSRFYGILLGGILLMYEFHHYLRPIFLLMYSFWIPQIISNVIRDSRKPLHPHYIIGVTVTRLAIPLYIFGCPNNFVRIEPDKSWCVWLTVFIGLQASILLLQHYLGSRCFIPRQILPEKYSYYRRFDQDARQATDCVICMTGIDLTQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPTA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1241 330 Pfam Ring finger domain 279 324 IPR001841 -
Dod10g1241 330 ProSiteProfiles Zinc finger RING-type profile. 280 324 IPR001841 -
Dod10g1241 330 PANTHER RING ZINC FINGER PROTEIN 1 329 - -
Dod10g1241 330 SUPERFAMILY RING/U-box 260 328 - -
Dod10g1241 330 PANTHER TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 1 329 - -
Dod10g1241 330 SMART ring_2 280 323 IPR001841 -
Dod10g1241 330 SMART ringv_2 279 324 IPR011016 GO:0008270
Dod10g1241 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 330 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1241 Dod-Chr10 32179187 32182203 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1241 267 330 C3H Transcription Factor Family AT1G53010 29.231 2.00e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1241 K23788 - gmx:100780140 614.764