Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1234 ATGAAGCGATATGTTTGCATCAATGACGATGAATCATCACAGGATTTGTACTGTGATAATCGAATATCAAACAGAAAATATACTGTATTGAACTTTATTCCAAAAAATTTATGGGAACAGTTCAGTCGGTTCATGAATCAGTACTTTTTGCTGATAGCTTGCCTGCAGCTATGGCCTCTCATTACTCCAGTGAATCCTGCCAGTACATGGGGTCCACTTATCTTTATTTTTGCAGTCTCTGCAACAAAAGAGGCATGGGATGATTATCATAGGTACCTGTCAGACAAGAAGGCAAATGAGAAGGAAGTCTGGGTTGTCAGAAAGGGCATCAAGAAACTTATCCAAGCCCAGGATATTCATGTAGGTAATATAGTATGGCTACGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGCTCCTCTGATCCACAGGGACTTTGCTATGTAGAGACTTCTGCGATGGATGGTGAAACTGATCTGAAGACACGGGTCATACCTTCTGCTTGCATGGGAATTGATGTTGAACTATTGCACAAAATTAAGGGTGTAATTGAGTGTCCCAATCCAGATAAAGACATCAGAAGATTTGATGCTAACATGCGGTTGTTCCCCCCATTTATTGATAATGATATATGCCCTTTAACCATTAAAAACACAGTTCTTCAGTCATGTTACTTGCGGAACACTGAGTGGGCATGCGGAGTGGCTGTGTATACAGGCAACGAAACCAAATTGGGCATGAGTAGAGGTATCCCAGAACCAAAGCTCACTGCCATGGATGCCATGATCGACAAGTTGACTGGTGCTATATTTGTATTCCAAATTGTTGTTGTTATCGTTCTTGGCATAGCGGGCAATGTTTGGAAGGACACAGAAGCAAAGAAACAATGGTATGTTCTTTACCCTGATGAAGGTCCCTGGTATGAACTGTTGATCATCCCTTTGCGGTTCGAGCTTCTTTGTTCTATCATGATACCCATTTCAATTAAGGTATCTCTGGATTTGGTGAAGAGCTTGTATGCAAAGTTTATTGATTGGGACCATCAGATGATTGACCTAGAGACTAGTATTCCATCCAATGCAACAAATACAGCGATAAGTGAGGACCTGGGACAGGTTGAGTACATATTGACTGACAAGACAGGCACCCTGACTGAGAATAAGATGATATTTAGAAGATGTTGTATTAGTGGCATTTTCTATGGAAATGAGAATGGCGATGCATTGAAAGATGTAGACCTTCTCAATTCTGTTTCCAGTGGTTCACCTGATGTTGTGCGGTTTCTTACAATTATGGCAATATGTAATACCGTCATCCCAACACGAAGCAAGACTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTTCTTGCTGCTGCCCGGTTGCATATGGTGTTCTTCAATAAGAATGGAAACATTCTTGAAGTGAAGTTTAACTCTTCAATACTTCAGTATGAAGTCCTGGAAACCTTAGAGTTTACCTCTGATAGAAAAAGAATGTCAGTAGTGTTGAAAGATTACCAAAATGGAAAAATGCTTCTTTTGACGAAAGGAGCAGATGAGGCTATTCTTCCTTATGCTCGTGCTGGGCAGCAAACTCGAAACTTCATTGAAGCTGTGGAGCAATATGCTCACTTGGGACTACGAACACTATGTTTGGCTTGGCGTGAGTTAAAGGAAGATGAATATCGAGAATGGTCTTTAATGTTTAAGGAGGCCAGTAGCACTTTGGTTGATAGGGAGTGGAGAGTGGCTGAGGTCTGCCAAAGAATAGAGCATAAATTGGAAGTTCTTGGTGTCACAGCAATAGAGGATCGATTACAGGATGGAGTTCCTGAAACAATAGAAACACTTAGAAAAGCTGGAATAAATTTCTGGATGCTAACAGGGGACAAGCAGAACACTGCAATACAAATTGCCCTGTCATGTAATTTTATTTCACCAGAACCGAAGGGCCAGCTTCTATCAATTGATGGAAAAACAGAGGATGAGGTTCGTAGAAGTTTAGAGAGAGTGCTGCTTACAATGCGGACAACTACCTCAGAACCTAAGGATGTGGCTTTTGTTATTGATGGTTGGGCTCTAGAGATTGCAGTTAGTCACTATCGTAAAGCTTTTACCGAGCTGGCAATATTGTCAAGGACCGCTATATGTTGTCGTGTGACACCATCACAAAAAGCACAGCTAGTGCAGATCTTAAAATCATGTGATTATAGAACATTGGCAATTGGTGATGGTGGGAATGATGTAAGGATGATACAACAAGCTGATATTGGTGTGGGCATTAGTGGCAGAGAAGGTTTGCAGGCAGCTAGAGCTGCTGATTACAGTATTGGAAAATTTAGATTCCTGAAAAGATTAATTCTGGTCCATGGCCGGTACTCTTACAACCGCACAGCATTTCTTTCTCAGTATTCATTCTACAAGTCCCTGCTGATATGTTTTATCCAAATCTTTTTTTCATTTATTTCAGGTGTCTCTGGAACCAGCCTCTTCAATTCTGTTAGCCTGATGGCTTATAATGTTTTCTACACAAGTGTTCCCGTTCTAGTCAGTGTGCTTGACAAAGATCTTAGTGAGGAAACTGTCATGCAGCATCCTCAAATCTTATTTTATTGCCAAGCGGGAAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGCAGTAGTTGTATTCATAATAAGCATACATACCTATGCCTATGATAAAAGTGAAATGGAGGAGGTTTCAATGGTTGCTCTCTCCGGTTGTATATGGTTGCAGGCTTTTGTAGTAACAATGGAGACAAATTCCTTTACAATATTGCAACATCTTGCTATATGGGGTAACTTGGCTGCCTTTTATGCCATCAACTGGATCTTCAGTGCTCTTCCTTCATCAGGGATGTATACAATTATGTTTCGATTGTGTCGACAACCATCATATTGGATATCGATTTTTCTCATGACTGCAGCCGGGATGGGTCCAATTCTAGCCATCAAGTACTTCCGATATACATATAGACCGAGCAAAATCAACACGCTTCAGCAGGCTGAACGTCTCGGTGGACCTATTTTGTCTCTTGGTACCATCGAGCCCCAGCCCCGAAATATTATTGAGAAAGATGTTTCTACCTTGTCAATTACACAACCCAAAAACAGAAATCCTGTGTATGAACCTCTATTATCTGATTCTCCAAATTCCACCAGAAGATCTTTTGGAGCAGGAACGCCATTTGATTTTTTTCAGTCACAGTCAAGATTATCACTATCTAGCTACTCAAGAAATTGCAAGGATAACTGA 3324 0.4097 MKRYVCINDDESSQDLYCDNRISNRKYTVLNFIPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYHRYLSDKKANEKEVWVVRKGIKKLIQAQDIHVGNIVWLRENDEVPCDLVLIGSSDPQGLCYVETSAMDGETDLKTRVIPSACMGIDVELLHKIKGVIECPNPDKDIRRFDANMRLFPPFIDNDICPLTIKNTVLQSCYLRNTEWACGVAVYTGNETKLGMSRGIPEPKLTAMDAMIDKLTGAIFVFQIVVVIVLGIAGNVWKDTEAKKQWYVLYPDEGPWYELLIIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIPSNATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNENGDALKDVDLLNSVSSGSPDVVRFLTIMAICNTVIPTRSKTGDILYKAQSQDEDALVLAAARLHMVFFNKNGNILEVKFNSSILQYEVLETLEFTSDRKRMSVVLKDYQNGKMLLLTKGADEAILPYARAGQQTRNFIEAVEQYAHLGLRTLCLAWRELKEDEYREWSLMFKEASSTLVDREWRVAEVCQRIEHKLEVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVRRSLERVLLTMRTTTSEPKDVAFVIDGWALEIAVSHYRKAFTELAILSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAVVVFIISIHTYAYDKSEMEEVSMVALSGCIWLQAFVVTMETNSFTILQHLAIWGNLAAFYAINWIFSALPSSGMYTIMFRLCRQPSYWISIFLMTAAGMGPILAIKYFRYTYRPSKINTLQQAERLGGPILSLGTIEPQPRNIIEKDVSTLSITQPKNRNPVYEPLLSDSPNSTRRSFGAGTPFDFFQSQSRLSLSSYSRNCKDN* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1234 1107 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 386 1106 - -
Dod10g1234 1107 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 10 330 - -
Dod10g1234 1107 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Dod10g1234 1107 Gene3D - 75 251 - -
Dod10g1234 1107 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 599 661 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod10g1234 1107 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 716 834 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod10g1234 1107 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 17 1023 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod10g1234 1107 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Dod10g1234 1107 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Dod10g1234 1107 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Dod10g1234 1107 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Dod10g1234 1107 Gene3D - 449 581 IPR023299 GO:0000166
Dod10g1234 1107 SFLD p-type atpase 364 801 IPR044492 -
Dod10g1234 1107 Pfam Cation transport ATPase (P-type) 436 532 - -
Dod10g1234 1107 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 386 1106 - -
Dod10g1234 1107 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 10 330 - -
Dod10g1234 1107 Gene3D - 602 790 IPR023214 -
Dod10g1234 1107 Pfam Phospholipid-translocating ATPase N-terminal 7 70 IPR032631 -
Dod10g1234 1107 SUPERFAMILY HAD-like 374 805 IPR036412 -
Dod10g1234 1107 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Dod10g1234 1107 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Dod10g1234 1107 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 1016 IPR023298 -
Dod10g1234 1107 Pfam E1-E2 ATPase 99 292 - -
Dod10g1234 1107 SFLD Haloacid Dehalogenase 364 801 - -
Dod10g1234 1107 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 569 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1234 Dod-Chr10 32118845 32131432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1234 1 1107 Primary Pumps ATPases AT5G44240 85.199 0.0 2003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1234 K01530 - gmx:100786505 2060.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1234 10 32118845 32131432 Dod10g1234 10 32118845 32131432 ECH