Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod10g1224 | ATGGGCGTGGACTACTACAAGGTCTTGCAGGTCGATAAGAGTGCCAGCGAAGATGACTTGAAGAAGGCCTACAGGAAGCTCGCCATGAAATGGCACCCCGACAAGAACCCCAACAACAAGAAAGAAGCTGAATCCAAGTTCAAACAAATCTCAGAAGCATACGAGGTGCTGAGTGATGCTCAAAAGAGAGCTATCTATGATCAATATGGGGAAGAGGGTTTGAAGGGTCAGGTGCCACCACCTGATGCTGCTTCTGGTGGTGGTGGAGCCACCTACTTTTCAACTGGGGACATTCCGGCGTCGTTTAGGTTCAATCCCCGAAACGCTGATGATATCTTTGCTGAGTTTTTTGGGTTCTCGAGTCCCTTTGGGGGCATGGGAGGGATGGGAAGGAGCAGTGGTGGTGGTGGTGGCGGCATGAGATCGAGGTTCTCTAATGGGATGTTTGGTGATGATGTGTTTGGATCTTTTGGTGAAGGTGGAGGAGTGAACATGAGTTCAGCTGGTCCACGCAAGGCTCCCCCTATTGAGAACAGGTTGCCTTGCACTCTAGAGGAGATATACAAAGGGACCACCAAGAAGATGAAGATCTCTAGGGAGATTGTTGATGCCAGTGGCAAAACCATGCCAGTGGAGGAGATCTTGACAATTAATGTCAAGCCTGGTTGGAAGAAGGGAACAAAGATCACCTTTCCACAGAAGGGAAACGAACAGCCAAATGTGACACCTGCAGACCTTGTTTTCATTATCGATGAAAAACCACACAGCGTATTCACTCGCGATGGAAATGATCTGATTGTCACCCAGAAGATTTCTCTCGTGGAGGCTTTAACTGGTTATACGGTGAACCTCACTGCACTGGATGGAAGAAACTTAACCATACCAATCAACAATGTTATTCATCCAGGTTATGAGGAGGTTGTCTCGAGGGAAGGAATGCCACTTCCAAAGGATCCATCAAAGAAGGGAAACTTGAGGATTAAGTTCAACATCAAGTTCCCCACTCGGCTCACTTCCGACCAGAAGTCAGGAATCAAGAAACTCCTGGCTGCCTGA | 1056 | 0.4811 | MGVDYYKVLQVDKSASEDDLKKAYRKLAMKWHPDKNPNNKKEAESKFKQISEAYEVLSDAQKRAIYDQYGEEGLKGQVPPPDAASGGGGATYFSTGDIPASFRFNPRNADDIFAEFFGFSSPFGGMGGMGRSSGGGGGGMRSRFSNGMFGDDVFGSFGEGGGVNMSSAGPRKAPPIENRLPCTLEEIYKGTTKKMKISREIVDASGKTMPVEEILTINVKPGWKKGTKITFPQKGNEQPNVTPADLVFIIDEKPHSVFTRDGNDLIVTQKISLVEALTGYTVNLTALDGRNLTIPINNVIHPGYEEVVSREGMPLPKDPSKKGNLRIKFNIKFPTRLTSDQKSGIKKLLAA* | 352 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod10g1224 | 351 | CDD | DnaJ_C | 174 | 337 | - | - | |
| Dod10g1224 | 351 | CDD | DnaJ | 4 | 59 | IPR001623 | - | |
| Dod10g1224 | 351 | Gene3D | - | 175 | 253 | - | - | |
| Dod10g1224 | 351 | PRINTS | DnaJ domain signature | 62 | 81 | IPR001623 | - | |
| Dod10g1224 | 351 | PRINTS | DnaJ domain signature | 24 | 39 | IPR001623 | - | |
| Dod10g1224 | 351 | PRINTS | DnaJ domain signature | 42 | 62 | IPR001623 | - | |
| Dod10g1224 | 351 | PRINTS | DnaJ domain signature | 6 | 24 | IPR001623 | - | |
| Dod10g1224 | 351 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 257 | 343 | IPR008971 | GO:0006457|GO:0051082 | |
| Dod10g1224 | 351 | Coils | Coil | 40 | 60 | - | - | |
| Dod10g1224 | 351 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 350 | - | - | |
| Dod10g1224 | 351 | Pfam | DnaJ domain | 4 | 67 | IPR001623 | - | |
| Dod10g1224 | 351 | Gene3D | DnaJ domain | 3 | 129 | IPR036869 | - | |
| Dod10g1224 | 351 | SUPERFAMILY | Chaperone J-domain | 3 | 123 | IPR036869 | - | |
| Dod10g1224 | 351 | PANTHER | DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE | 1 | 350 | - | - | |
| Dod10g1224 | 351 | Gene3D | - | 255 | 335 | - | - | |
| Dod10g1224 | 351 | Pfam | DnaJ C terminal domain | 176 | 334 | IPR002939 | - | |
| Dod10g1224 | 351 | ProSitePatterns | Nt-dnaJ domain signature. | 47 | 66 | IPR018253 | - | |
| Dod10g1224 | 351 | ProSiteProfiles | dnaJ domain profile. | 4 | 70 | IPR001623 | - | |
| Dod10g1224 | 351 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 175 | 255 | IPR008971 | GO:0006457|GO:0051082 | |
| Dod10g1224 | 351 | SMART | dnaj_3 | 3 | 62 | IPR001623 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod10g1224 | Dod-Chr10 | 32035093 | 32038743 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod10g1224 | 5 | 69 | C2H2 Transcription Factor Family | AT1G74250 | 40.580 | 1.28e-09 | 57.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod10g1224 | K09510 | - | gmx:100797487 | 584.719 |