Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1222 ATGCTTCACGGAACCATACCGGGGACACTGTTCTCCGGGTTGAAGAGTGTTGTTCAGATCGAGCTCTTCGAGAATTCCCTCTCCGGGGATCTGCCACGTGGCGTGATCGGGAACATGACCGAGTTGGAGTGGTTCGACGCGTCCGGGAACGAGTTGACTGGGACGATTCCGAGCGAGCTGTGCGGGTTGAAGAAACTCGGGTCTCTCAACTTGTTCAATAACAAGCTTGAAGGTTTCTTGCCGGAGAGTATAGTAAAGTCCGAGAGAATGTATGAGCTCAAATTGTTCAACAACTCGCTCACCGGCTCTTTGCCGAGTGGACTCGGGAGTAACTCGCCGCTGCAGATCCTCGACCTTTCGTATAATCGATTTTCCGGCGAGATTCCGGCTGGTCTGTGCCGCCGTGGAAAGTTGCAGGAGCTGTTGCTGATTTACAATTCGTTCTCGGGGAGAATCCCCGAGAGTCTCGGTGATTGCAACAGCTTGATGAGGGTTCGGCTTAGGAACAATATCCTTAATGGAACTGTTCCTGATGCTATGTGGGGTTTGCCCCATCTGTACTTTTTTGAGCTTGCTGAGAATTCCCTTTCTGGACCGGTTCCTAATTCGATTTCTGGTGCTCGCAACATGTCAAGTTTGTTGCTTTCGAGGAACATGTTTTCTGGGTCGGTTCCTGAGGCAATTGGGGACTTGGACAACCTTGTTGAGTTTGTTGCCAGCCACAATAGGCTTTCTGGTCCGATTCCTACTGGTTTGGTGAAGTTGAGCCAGTTGGGCAAGCTTGTTCTAGGTAACAATGAACTTTCTGGTGAAATTCCTGACAGAGTTGGTAGTTGGAAGAATCTCAATGAGCTTGATTTGTCGAATAATAGGCTTGATGGTAATATTCCGATTGAATTAGGAACGTTGCCGGTGCTTAATTATCTTGATCTTTCTGGGAATCGCCTTTCTGGTGGTATTCCAAATGACCTGCAGAATTTGAAGCTTAATTTGCTGAATTTGTCGAACAATCAGCTGTCAGGGGGTATCCCTGAACTTTATGACAATAAGAATTATAGGAAGAGTTTTCTAGGAAATCCAGGGCTCTGTGGTGATATCACTGGACTTTGCCAAAGCTTTGGTGAGAGTAAGAACCGGAGCAATGAGTGGGTTTTCGCATTCATTTTTGTGCTTGCTGGTATTGTGCTTCTTGTTGGGGTGGCATGGTTTTGCCTCAAGTTCCGGAGCTTTAGAAAGATGAAAAAGAGACCTAACATGTTAAAGTGGAGGTCTTTCCATAAGCTGGGGTTCAGTGAGTTTGAAGTTGTTAAGTTTCTGAGTGAGGATAGTGTCATAGGGAGTGGAGCTTCTGGGAAGGTTTACAAGGTGGTGCTAAGTAATGGTGAGTTTGTGGCAGTGAAGAAATTGTGGGGAGCAACTAAGATGGAAAATGGAAGTGTTGGTTCTGAAAAGGATGGGTTCGAAGCCGAAGTCGAAACATTAGGAAAGATTAGGCACAAGAATATTGTGAGGTTGTGGTGTTGTTGTAAGAGTGGGGATAGCAAGCTCCTGGTTTATGAATATATGTCAAATGGGAGCCTGGCTGATTTGCTGCACAGCAGCAAGAAAAGCTTGTTGGATTGGCCAACTAGATATAGAATTGCTATTGATGCCGCTGAGGGGCTTTCTTATTTGCATCACGGTTGTGTTCCCCCTATTGTTCACAGGGATGTAAAATCTAAGAATATATTGCTAGACCAAGAGTTTGGAGCAAAAGTTGCAGATTTTGGAGTTGCCAAAATTGTTGGAGTCAGTCAACGGGCAGAACCCATGTCTGTAATTGCGGGATCTTATGGTTACATTGCACCAGAATATGCTTACACTCTTCGAGTGAACGAAAAGAGTGACATTTATAGCTTTGGGGTGGTCATTTTGGAGTTGGTAGCTGGTAGACCCCCTCTTGATCCAGAGTATGGTGAACAAGATCTGGTGAAATGGGTTTCCTCCACATTGGAACAAAGTGGACCAGATCAAGTGATTGATCCAACCCTGGATGTTAAATACAAGGAAGAAATCAGCAAGGCACTCAGCATAGGGCTTCTTTGCACTAGCCCTCTTCCTATAAGCCGCCCTTCAATGCGTAGAGTGGTGAAAATGCTGCAAGAAATAACTGCAGTTCCCAAACCCAGAAGTGGAAAATTCTCCCCTTACTATCAAGAAGAGGCCTCTGATAATGAACATCAGGGAAGCATGGTTTGA 2238 0.4571 MLHGTIPGTLFSGLKSVVQIELFENSLSGDLPRGVIGNMTELEWFDASGNELTGTIPSELCGLKKLGSLNLFNNKLEGFLPESIVKSERMYELKLFNNSLTGSLPSGLGSNSPLQILDLSYNRFSGEIPAGLCRRGKLQELLLIYNSFSGRIPESLGDCNSLMRVRLRNNILNGTVPDAMWGLPHLYFFELAENSLSGPVPNSISGARNMSSLLLSRNMFSGSVPEAIGDLDNLVEFVASHNRLSGPIPTGLVKLSQLGKLVLGNNELSGEIPDRVGSWKNLNELDLSNNRLDGNIPIELGTLPVLNYLDLSGNRLSGGIPNDLQNLKLNLLNLSNNQLSGGIPELYDNKNYRKSFLGNPGLCGDITGLCQSFGESKNRSNEWVFAFIFVLAGIVLLVGVAWFCLKFRSFRKMKKRPNMLKWRSFHKLGFSEFEVVKFLSEDSVIGSGASGKVYKVVLSNGEFVAVKKLWGATKMENGSVGSEKDGFEAEVETLGKIRHKNIVRLWCCCKSGDSKLLVYEYMSNGSLADLLHSSKKSLLDWPTRYRIAIDAAEGLSYLHHGCVPPIVHRDVKSKNILLDQEFGAKVADFGVAKIVGVSQRAEPMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVAGRPPLDPEYGEQDLVKWVSSTLEQSGPDQVIDPTLDVKYKEEISKALSIGLLCTSPLPISRPSMRRVVKMLQEITAVPKPRSGKFSPYYQEEASDNEHQGSMV* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1222 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Dod10g1222 745 ProSiteProfiles Protein kinase domain profile. 439 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1222 745 ProSiteProfiles Leucine-rich repeat profile. 281 304 IPR001611 GO:0005515
Dod10g1222 745 PRINTS Leucine-rich repeat signature 303 316 - -
Dod10g1222 745 PRINTS Leucine-rich repeat signature 282 295 - -
Dod10g1222 745 Gene3D Ribonuclease Inhibitor 1 373 IPR032675 -
Dod10g1222 745 SMART serkin_6 439 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1222 745 Pfam Leucine rich repeat 257 316 IPR001611 GO:0005515
Dod10g1222 745 Gene3D Phosphorylase Kinase; domain 1 423 521 - -
Dod10g1222 745 MobiDBLite consensus disorder prediction 724 745 - -
Dod10g1222 745 SUPERFAMILY Protein kinase-like (PK-like) 436 714 IPR011009 -
Dod10g1222 745 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 726 - -
Dod10g1222 745 SUPERFAMILY L domain-like 6 373 - -
Dod10g1222 745 ProSitePatterns Protein kinases ATP-binding region signature. 445 468 IPR017441 GO:0005524
Dod10g1222 745 Pfam Protein kinase domain 441 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1222 745 Gene3D Transferase(Phosphotransferase) domain 1 522 726 - -
Dod10g1222 745 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 2 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1222 Dod-Chr10 32015231 32017731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1222 2 745 Receptor kinase-like Gene Family AT1G28440 59.764 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod10g1222 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1222 - - aip:107613214 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1222 10 32015231 32017731 Dod10g1222 10 32015231 32017731 ECH