Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1221 ATGACTCAGTGCAACTACCCTGAAAACAATCATAGCACCATTGTGGAGAGGCGCAAAGATAGCTTAATTAGAACTTGTCCTGCATGTGGTCATCATATCAACTGCCAAGAGCAGGCTGCTGGAATTCACGACTTACCTGGGCTGCCTGCTGGAGTGAAGTTTGATCCAACTGATCAAGAGATTCTTGAACATTTGGAAGCGAAGGTGCGCTCTGATATCCACAAGCTTCACCCCTTAATTGATGAGTTCATCCCTACTCTTGAAGGCGAGAATGGAATCTGCTGCACTCATCCAGAAAAGTTGCCAGGAGTTAGTAAGGACGGCTTGATCCGACATTTCTTTCACCGGCCTTCCAAAGCATACACAACAGGAACAAGGAAAAGGAGAAAGGTGCACACAGATGCAGATGGAAGTGAGACCAGGTGGCACAAAACAGGTAAGACTAGGCCAGTCTACATCAGTGGCAAGCTGAATGGGTACAAGAAAATTCTTGTGCTCTACACTAACTACAAAAAGCAAAGAAAGCCTGAGAAAACAAATTGGGTGATGCACCAGTACCACCTTGGCAATAATGAAGAGGAGAAGGAGGGGGAGTTAGTTGTGTCCAAAGTTTTCTATCAAACACAGCCTAGACAATGTGGTTCACTGATGAAAGACTCGTTTCCTGCAAAACTAAAGGATCATCAAGGCGTGCATGAGGTAACCAATCATAAGAACAATGGTTTTGTTGAGTACTACAATACATCTTTCATATCCTTTGATCAAGGGGACCAACATAGGTCTAGCAATGCACAAATGATTTCCCATTTTCCCGTACATGATGGAGCTCCTTTCATTCCTTGA 843 0.4413 MTQCNYPENNHSTIVERRKDSLIRTCPACGHHINCQEQAAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVYISGKLNGYKKILVLYTNYKKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLMKDSFPAKLKDHQGVHEVTNHKNNGFVEYYNTSFISFDQGDQHRSSNAQMISHFPVHDGAPFIP* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1221 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 279 IPR044799 GO:0003700
Dod10g1221 280 Gene3D NAC domain 57 211 IPR036093 GO:0003677|GO:0006355
Dod10g1221 280 ProSiteProfiles NAC domain profile. 48 207 IPR003441 GO:0003677|GO:0006355
Dod10g1221 280 SUPERFAMILY NAC domain 43 207 IPR036093 GO:0003677|GO:0006355
Dod10g1221 280 MobiDBLite consensus disorder prediction 121 143 - -
Dod10g1221 280 MobiDBLite consensus disorder prediction 127 143 - -
Dod10g1221 280 Pfam No apical meristem (NAM) protein 49 188 IPR003441 GO:0003677|GO:0006355
Dod10g1221 280 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1221 Dod-Chr10 32008049 32010816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1221 24 280 NAC Transcription Factor Family AT4G28500 63.214 1.96e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g1221 NAM 2.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1221 - - gmx:100791648 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1221 10 32008049 32010816 Dod10g1221 10 32008049 32010816 ECH