Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1203 ATGGGTAGTAATAATAATGGTTTCTATTTTGATGACCACAACAACCATGACCCATTCGTCAGTTTCCACAACCCACCACCATCAGAGCACAGCGATTGGAACAGGAGGATCTTGTACATGGCCATAGTTTCCTTAACAGCGGTCTTGTTTTTGGTGTTTGCACTTCACATCTACGCAAGGTATGTTCTTCGACGCCAAGCTCGCCGCCGTGTCGCCATTCACCAGCTCAGCCTCACGGTGGCACAATCAATGCAATCATCAAACAACAACAACAACACTGGCCTCGACCCCAACATCATAGCCACTCTTCCCACCTTCATCTTCAAAACAAAGAGACCCCAAAAGAAGCATGAAGAAGGAGAGGAACACGATGATGATCATGTTGATGTTGATGCCTCTATTGTCGAGTGTGCAGTGTGTTTGAGTGCTCTAGAGGATGAAGAAACGGTCAGGATGCTACCAAATTGCAAGCACACTTTCCATGTTGGTTGCATAGATACATGGTTGGCTTCGCACTCCACGTGTCCCATTTGTCGAACCAAGGTTGAGCCAATAATGTTAAGGCTTCTTGAGCCTCAGCCACGTGAGGGTCCTATCGGTCTTCTTGATGGTGCTGCACCACCTGCACAGTCTACTCCAACTTTGTTTGAACCAATTGAAGGCACATCTGATGGTAGTAGTAATAATAATAATGGTGCTATTGTGGGGTCACCAAAAATCAGTGGCTCGGTTTCAAGGTTGAGCTCTTTCAGGAGGATTCTTAGTAGGGAGAGATCGTCTAGGAGGATCCAACCTTCTAACCATGATGTTGATGACGTTGAACATGATTTAGAGAGGCAGTGA 843 0.4614 MGSNNNGFYFDDHNNHDPFVSFHNPPPSEHSDWNRRILYMAIVSLTAVLFLVFALHIYARYVLRRQARRRVAIHQLSLTVAQSMQSSNNNNNTGLDPNIIATLPTFIFKTKRPQKKHEEGEEHDDDHVDVDASIVECAVCLSALEDEETVRMLPNCKHTFHVGCIDTWLASHSTCPICRTKVEPIMLRLLEPQPREGPIGLLDGAAPPAQSTPTLFEPIEGTSDGSSNNNNGAIVGSPKISGSVSRLSSFRRILSRERSSRRIQPSNHDVDDVEHDLERQ* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1203 280 PANTHER RING FINGER DOMAIN-CONTAINING 33 280 - -
Dod10g1203 280 MobiDBLite consensus disorder prediction 208 280 - -
Dod10g1203 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 185 IPR013083 -
Dod10g1203 280 CDD RING-H2_PA-TM-RING 136 179 - -
Dod10g1203 280 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 33 280 - -
Dod10g1203 280 SUPERFAMILY RING/U-box 115 185 - -
Dod10g1203 280 MobiDBLite consensus disorder prediction 251 280 - -
Dod10g1203 280 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Dod10g1203 280 SMART ring_2 137 178 IPR001841 -
Dod10g1203 280 MobiDBLite consensus disorder prediction 215 250 - -
Dod10g1203 280 Pfam Ring finger domain 136 179 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1203 Dod-Chr10 31833446 31834841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1203 15 280 C3H Transcription Factor Family AT2G42360 44.238 3.94e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1203 K19038 - gmx:100780265 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1203 10 31833446 31834841 Dod10g1203 10 31833446 31834841 ECH