Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1202 ATGGGAATGAAGAGCACCGGGGGAGAGATAGTTCAAGTCCAAGGGGGCCACATTATTCGATCAACAGGCAGAAAAGATCGCCACAGCAAGGTCCACACTGCGAAAGGACCGCGTGATCGAAGGGTTAGGCTCTCAGCACACACAGCAATTCAGTTCTATGATGTTCAAGACAGGCTTGGTTATGACAGGCCAAGCAAGGCTGTGGACTGGCTCATCAAGAAGGCGAAATCCGCCATCGACAAGCTTGCTGAGCTCCCTCCATGCCACCCTACACCCCAGACAAATGAAGCACAGGAAGTGGAGGAGCAGAACAATGATGCTGCAGGCTCAGCTGAGAATATGGCAATTGGAGAACAATCTGAGTCTTCTGGTTACAACAACTTTCAGCTCCAAAGGCAGCTTGGTGAGGACCCTGAAAACCACCACCACCACCACTCAGCATTCATTCCATCACCTATTGACACTGATGGCATAGCATTTTTTCCCACAACTTCTGCTGCTTCATCTATCAATTTCCAATCCTACCCTCCTGACATAATTTCAAGAACCAACAACAACTCAGAAGACCTTGGCCTTTCCCTTCATTCTTTCCAAGACCCTGGCCTAATTCAGTCTCAAGGAGGTGGAAGTCAGAATCAAACATCTTCTAGTGATCACCAAACCCTCTTTGCTGGCTCAACTGTTGGGTTTGAGGCCAATTATCAAAGGATTGTGGCTTGGAACAATGATGCTGCAGCCACCAATATGAACCGTGCCGGGTTCATGTTGAATTCACCTGGTTTTCTAGGCCAAGGTGGTAATTCTTCTGCTTTTTCTCAAAGGGGTACCCTTCAGTCCAGTTTCTCACCGTCAGTTCGCCCTTGGAATGAGATTCCAATCGATTCCTCTGAGCATCACAAATCTCAGCCAATACACCAAGCTTCCATCTTTGGCGGCAGGTTCCTTTTTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGGATTCAAGGTGAGGATGAGCGCCATGGAGTTGGTTCTGACAGGCCATCATCCTCTGCCTCACCTAATTCCCATCACTGA 1059 0.4854 MGMKSTGGEIVQVQGGHIIRSTGRKDRHSKVHTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPCHPTPQTNEAQEVEEQNNDAAGSAENMAIGEQSESSGYNNFQLQRQLGEDPENHHHHHSAFIPSPIDTDGIAFFPTTSAASSINFQSYPPDIISRTNNNSEDLGLSLHSFQDPGLIQSQGGGSQNQTSSSDHQTLFAGSTVGFEANYQRIVAWNNDAAATNMNRAGFMLNSPGFLGQGGNSSAFSQRGTLQSSFSPSVRPWNEIPIDSSEHHKSQPIHQASIFGGRFLFDALPGFCIPARIQGEDERHGVGSDRPSSSASPNSHH* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1202 352 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Dod10g1202 352 MobiDBLite consensus disorder prediction 23 37 - -
Dod10g1202 352 MobiDBLite consensus disorder prediction 91 109 - -
Dod10g1202 352 MobiDBLite consensus disorder prediction 1 37 - -
Dod10g1202 352 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 352 IPR005333 GO:0003700
Dod10g1202 352 MobiDBLite consensus disorder prediction 198 219 - -
Dod10g1202 352 MobiDBLite consensus disorder prediction 330 352 - -
Dod10g1202 352 Pfam TCP family transcription factor 23 131 IPR017887 -
Dod10g1202 352 MobiDBLite consensus disorder prediction 84 109 - -
Dod10g1202 352 PANTHER TRANSCRIPTION FACTOR TCP4 2 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1202 Dod-Chr10 31824926 31827270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1202 8 351 TCP Transcription Factor Family AT3G15030 42.500 7.70e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod10g1202 TCP 3.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1202 - - gmx:100814907 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1202 10 31824926 31827270 Dod03g1854 03 35960752 35964540 ECH
Dod10g1202 10 31824926 31827270 Dod10g1202 10 31824926 31827270 ECH