Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1183 ATGGATCTCAACGACAATCAAGGTAGCCCGTCGTTTCCGCGGGTTTGTAGATATGATGTGTTCATCAGCTTCAGGGGTCCTGACACCCGTGACCGTTTTGTTGATCATCTCTACAATCATCTACTCAGAAAAGGCATTTTCGTCTTCAAAGATGACGAGAGCCTTGAGAAAGGAGAATCCATTTCACCACAACTTGTACAAGCAATCAAAGGTTCACGGATTTCTCTTGTTGTCTTCTCAGAAAGTTATGCTGACTCCAAGTGGTGTTTGGACGAAATGGCCATTATAGCCGAATGCAAGAGGGAATTGGAACAAAAAGTTTTCCCAATTTTTTATCATGTGGATCCATCTCAAGTGCGATGTCAAAATGGCGTGTACGGGGATGCTTTAGATTTATATTATGAAGAATCCGAGGAAAATCGTGGCAAGGTTAGTCGGTGGAGTAGTGCTATGAAGGAGTTGGCGAATTTGGCTGGTTGGGATATAAGAAGTGGAAAAGAGAATGGCATAATTGAAGGTATTGTACAAAAGGTGATAGATGCATTGCGTCATAAATTCTCAGGGCTTGCAGATGATCTAATTGGAATACAATCTCGAGTTGAAGTATTAGAAAAGCTTCTAAACTTAAGTCCTAAGGATGATAGTCGTCAAGTCTTAGGGATTTGGGGTATGGGTGGGATAGGAAAGACAACTCATGCTAATGTTTTGTATGATAAAATCTCTTATCAGTTTAGTGCTTCCTGTTTTATTGAGGACGTAAACCAAATTTATAAAACCGGTGGTGCTATAGCTGTACAAAAACAAATTCTTCTTCAAACTCTAGCTGAAAAAAACCTTGACACATGTAGTCCATCTAAAATATCTAGGACTATGAGAAATAGGCTACATAGCATCAAGGTCCTTATAATTCTAGACAATGTTAATGATTCAGAGCAATTCACAAATTTGAAGATAGAGCCTGAATTTCTTGGCGCTGGGAGTAGATTAATCATAACAACTAGAGATGAGCATGTTTTAAAAGTGTGTGGGGCATATGAAGTTTACAATGTTCCACTATTGAGTAATATTGATGCTCGTGAACTTTTTTGGAGCAAAGCCTTCAAAAGATTCTATCCACCCCACAATTGTGAGGAGCTGATTCCTGATATATTGAAATATGCTCAATGTCTTCCATTAGCAATTGAAGTATTAGGTTCTTTCTTGGGTTCCCGAGATGATACTCAACGGAAAGAAGCCTTGAAGCGATTGGGGAGAAATGATGCTGATGACAAAATCATGGATGTGCTTCAATTAAGTTATGAGGGATTAAGTAACACAGAGAAAGAAATTTTTTTGCATATTGCTTGTTTCTTTAATGGGGAAAGAGTGGACTATGTTACACGAATTTTAGATTGTTGTCAACTAACTCCAGGTTTTGGAATTAGAGTTATCATCGAGAAATCACTTATAGCCATTAGAAATGGTGAAATCTATATGCATAAAATGTTGGAAGAGTTGGGAAAGAACATTGTCCAAAGACATTTTCCTACAAAGCAAGGATCGTGGAGTAGATTGTGGCTTTATGAAGATTTTCATCATGTCATGGAATCAGAAACGGGAACAAACAATGTTGAAGCCATAGTTCTGGATCAAAAAGCTGATGTATCCAAATATAGCACGTTGGATGCTGAAGAATTTTCAAGAATGAAGAGTCTTAAATTGCTCATATTACATCATGAGAACTTTTCAAGAAATCCCAATTTTCTTTCCAATAGTCTACATTATCTTACGTGGCATGGCTACCCTTTCACTTCTTTGCCACCAAAGTTTGAGCCAAGTAGACTTGTTGAGCTGAATTTGCCTAATAGCAATATCAATCTACTATGGGAAGGCATCAAGCATCTCCCAAATTTGAAAAGGATAGATTTGAGCAACTCCAGATATCTTCAGGAGACACCCAATTTTGAAAAGATGCAAAGTCTGGAGCGGCTTGATCTTACGGGATGCACAAACCTGGAGTCGGTTGACCCATCAATCTCACAATTAAGTCTACTTGTTTTCTTGAGTTTGCAAAATTGTTGTAGTCTGGTCAGCCTTGATCTGCTCAGATACAAGGAACCCACATTCGAGAATAAAGCAAGGAGATTGTCACCTTCATGCAAACTGGACTCTCTGAGAGTTTTACGCCTCTCTGGCTGCACGAAGCTTGAAATGACGCCAGCTTTTCGGGGTTTTCCAAATCTTGAGTACCTTGATTTTAAGCAATGTGTAAGTTTATCCGCCGTTGATACATCTATTGGGTATCTTAAAAAGCTTAAATACTTGAGTTTGAGAGGATGTACAAATCTTGTCCGGTTGCCCCCCAACATTAATGATTTGACATCTCTTCAAATTCTGGATTTAGAAAGATGCTTGAAATTGACGGATCTTCCCCTAGCATCTGAAGTCATGCCTTTCTCCAATCTAGAATCTTTGATAGTTTTGGACCTTGGCTTCTGTAATCTAACTAGCATCCCTGATGCTATTGGAGATTTGAGGTGTTTGGAAAGACTAAATCTAGAGGGAAACAAGTTTACTATACTACCCAGTGGCATGAACAAGCTACTCGGCCTAGCATATCTAAATTTGGCGCACTGCCATGAGCTTCGACGTTTGACTAGACTCCCATCACAACATGCTTCATCAGGTGGAAGGTATTTTAAAACAGAATCTGGATCTCGTAATCATAGATCAGGATTGTATATTTTCGATTACCCCGATTCAGCTGGCTGGGGTGATGGAAGTGGAGCTTGGTGTTTATTGGCACTTCCATGGCTATTTAGACTACTTCAGGCACCCCGCCACTTTCGATGTGGCTTTGACATTGTTGTTCCAGGGAGGATTGACTATTCTAATGGGTGGTTCAATCATCAATTTGAAGGAGATTCAATAATAAGGATAGTGGACTTTGATGCTGTCACTGACAACTGGATTGGCTTTGCCTTTTTTGCATCATTTCAGGCAAACCCTTGGCCGTCAATTTCAAATGATTCGTCTTCCTCGCTTCTACCACATCCTTTTTGTCTCTCTTTTGAAACTGAACAAGCAGAAGAAACATTCAGTATGCCACTTCGTTTGGACCTGGCCACTACTTATGGTTCGGACCATGTTTGGCTGATTTATATCTCTCGACCACATTGCCATTTTGTGAAATCAGGAGCGCATATCTCATTTAAAGGGCCCCCACATTGGAAGACTAGGAATTGGGGTTTACGAATATTGCAAGAGCAAGCAGGGCAAGCATACTCTGATTTTCTTAAGAAACCACGGATGGGGTTTAAATATGTTCAAGAAAACAGAGGCAGTTCTGTGCCTAAAGTCCAGCTTCCCTATAATTGGCTGGTTACTGATGAAGAGGAACATGAAAACATAGAAGCCAAGGGCAAAGAAAATGATCTCTCAAATGTGGGTCTTACAACTAGCCACCATCAAGAGCACACAGCATCCTCCTCAAGTTATGTTCCTGTCTGTTTCCTATAA 3498 0.3988 MDLNDNQGSPSFPRVCRYDVFISFRGPDTRDRFVDHLYNHLLRKGIFVFKDDESLEKGESISPQLVQAIKGSRISLVVFSESYADSKWCLDEMAIIAECKRELEQKVFPIFYHVDPSQVRCQNGVYGDALDLYYEESEENRGKVSRWSSAMKELANLAGWDIRSGKENGIIEGIVQKVIDALRHKFSGLADDLIGIQSRVEVLEKLLNLSPKDDSRQVLGIWGMGGIGKTTHANVLYDKISYQFSASCFIEDVNQIYKTGGAIAVQKQILLQTLAEKNLDTCSPSKISRTMRNRLHSIKVLIILDNVNDSEQFTNLKIEPEFLGAGSRLIITTRDEHVLKVCGAYEVYNVPLLSNIDARELFWSKAFKRFYPPHNCEELIPDILKYAQCLPLAIEVLGSFLGSRDDTQRKEALKRLGRNDADDKIMDVLQLSYEGLSNTEKEIFLHIACFFNGERVDYVTRILDCCQLTPGFGIRVIIEKSLIAIRNGEIYMHKMLEELGKNIVQRHFPTKQGSWSRLWLYEDFHHVMESETGTNNVEAIVLDQKADVSKYSTLDAEEFSRMKSLKLLILHHENFSRNPNFLSNSLHYLTWHGYPFTSLPPKFEPSRLVELNLPNSNINLLWEGIKHLPNLKRIDLSNSRYLQETPNFEKMQSLERLDLTGCTNLESVDPSISQLSLLVFLSLQNCCSLVSLDLLRYKEPTFENKARRLSPSCKLDSLRVLRLSGCTKLEMTPAFRGFPNLEYLDFKQCVSLSAVDTSIGYLKKLKYLSLRGCTNLVRLPPNINDLTSLQILDLERCLKLTDLPLASEVMPFSNLESLIVLDLGFCNLTSIPDAIGDLRCLERLNLEGNKFTILPSGMNKLLGLAYLNLAHCHELRRLTRLPSQHASSGGRYFKTESGSRNHRSGLYIFDYPDSAGWGDGSGAWCLLALPWLFRLLQAPRHFRCGFDIVVPGRIDYSNGWFNHQFEGDSIIRIVDFDAVTDNWIGFAFFASFQANPWPSISNDSSSSLLPHPFCLSFETEQAEETFSMPLRLDLATTYGSDHVWLIYISRPHCHFVKSGAHISFKGPPHWKTRNWGLRILQEQAGQAYSDFLKKPRMGFKYVQENRGSSVPKVQLPYNWLVTDEEEHENIEAKGKENDLSNVGLTTSHHQEHTASSSSYVPVCFL* 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1183 1165 Gene3D - 353 437 IPR042197 -
Dod10g1183 1165 Pfam Leucine rich repeat 788 851 IPR001611 GO:0005515
Dod10g1183 1165 PRINTS Disease resistance protein signature 218 233 - -
Dod10g1183 1165 PRINTS Disease resistance protein signature 294 308 - -
Dod10g1183 1165 PRINTS Disease resistance protein signature 649 665 - -
Dod10g1183 1165 PRINTS Disease resistance protein signature 387 401 - -
Dod10g1183 1165 SMART till_3 17 157 IPR000157 GO:0007165
Dod10g1183 1165 Gene3D Ribonuclease Inhibitor 547 704 IPR032675 -
Dod10g1183 1165 Gene3D Ribonuclease Inhibitor 705 809 IPR032675 -
Dod10g1183 1165 Gene3D Ribonuclease Inhibitor 810 890 IPR032675 -
Dod10g1183 1165 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Dod10g1183 1165 Gene3D - 188 346 IPR027417 -
Dod10g1183 1165 SUPERFAMILY "Winged helix" DNA-binding domain 423 528 IPR036390 -
Dod10g1183 1165 SMART LRR_typ_2 838 861 IPR003591 -
Dod10g1183 1165 SMART LRR_typ_2 762 786 IPR003591 -
Dod10g1183 1165 SMART LRR_typ_2 651 675 IPR003591 -
Dod10g1183 1165 SMART LRR_typ_2 815 837 IPR003591 -
Dod10g1183 1165 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 642 879 - -
Dod10g1183 1165 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 630 - -
Dod10g1183 1165 Gene3D - 15 187 IPR035897 -
Dod10g1183 1165 Pfam TIR domain 18 178 IPR000157 GO:0007165
Dod10g1183 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 447 IPR027417 -
Dod10g1183 1165 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 642 879 IPR044974 GO:0006952
Dod10g1183 1165 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 630 IPR044974 GO:0006952
Dod10g1183 1165 Pfam Leucine Rich Repeat 608 626 IPR011713 -
Dod10g1183 1165 Pfam NB-ARC domain 204 434 IPR002182 GO:0043531
Dod10g1183 1165 SUPERFAMILY L domain-like 553 878 - -
Dod10g1183 1165 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1183 Dod-Chr10 31566182 31580693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1183 705 878 WRKY Transcription Factor Family AT4G12020 37.143 2.86e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1183 - - var:108332841 1197.19