Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1179 ATGGACGCCTCTACCGAAATTCCGCCTCCCTCCGTCGTCGCTGCCGCTGCACCGCCGTCCCGTCCGTCGGCGTTCCCAGGCCGGGAAGACTGCTGGTCGGAGGACGCCACGTTCACACTCATCGACGCGTGGGGCTCCCGCCACCTCCAACTCAACCGCGGCAACCTCCGCCAGAGCCACTGGCAGGAAGTCGCCGCCGCTGTCAACCTCCGCCACGGCCACGACCGCCGCTCCCGCCGCACCGACGTCCAGTGCAAAACCGAATCGACACCCTCAAGAAGAAGTACAAGCTCGAGAGGGCTAGGGCTCCAGATTCTTCCGCCGTCGGCGACGGAGACGCCGCCGCCGGAGGCGAAGAAGCAGTTGCCGCCGCCAGTCACCCGCCGGAAATCTGCTCCGGCGTTTAACTCGCCGCCGTGGACGGTGACTCCGGTGGCCCCCCGATCAGGCACACAGAGGCGGCCGGCGCCGGGGAGTGTGGAGGATTCTTACTTTCGCCGGAGTTTCATGACCTTTGCCCGCGCCGCGGTTGCGGCGGCGGTGGTGGAGAGTGGGGACTTAAAGGGGGGCGGTGAGAGAAGGAAGAGGGGACGAAAGAGTGATTTTGAAGAAGAAGAATGGGAAATGGGGTATAGGGAATTGGCAGAAGCTATTGAGAGGGTTGGGGAGATATATGAGAGGGTGGAGGGTGCAAAGAGGAGGCAAATGGTTGAGTTGGAGAAGCAAAGGATGCAGTTTGCTAAGGATTTGGAGTGCCAGAGGATGCAGCTCTTCATGGAGACTCAGCTTCACCTCCTCAAAATCAACCGCTCCTCCAAGAGGGATCCTGCTCGTGCTGCTGATAGTTTCTCGTAG 855 0.6164 MDASTEIPPPSVVAAAAPPSRPSAFPGREDCWSEDATFTLIDAWGSRHLQLNRGNLRQSHWQEVAAAVNLRHGHDRRSRRTDVQCKTESTPSRRSTSSRGLGLQILPPSATETPPPEAKKQLPPPVTRRKSAPAFNSPPWTVTPVAPRSGTQRRPAPGSVEDSYFRRSFMTFARAAVAAAVVESGDLKGGGERRKRGRKSDFEEEEWEMGYRELAEAIERVGEIYERVEGAKRRQMVELEKQRMQFAKDLECQRMQLFMETQLHLLKINRSSKRDPARAADSFS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1179 284 MobiDBLite consensus disorder prediction 88 104 - -
Dod10g1179 284 MobiDBLite consensus disorder prediction 70 160 - -
Dod10g1179 284 MobiDBLite consensus disorder prediction 70 87 - -
Dod10g1179 284 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 14 86 - -
Dod10g1179 284 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 127 275 - -
Dod10g1179 284 MobiDBLite consensus disorder prediction 134 148 - -
Dod10g1179 284 MobiDBLite consensus disorder prediction 1 27 - -
Dod10g1179 284 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 86 IPR044823 -
Dod10g1179 284 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 127 275 IPR044823 -
Dod10g1179 284 Pfam Myb/SANT-like DNA-binding domain 29 87 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1179 Dod-Chr10 31476054 31479745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1179 21 87 Trihelix Transcription Factor Family AT3G14180 56.716 1.49e-19 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod10g1179 Myb_DNA-bind_4 6.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1179 - - gmx:100811154 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1179 10 31476054 31479745 Dod10g1179 10 31476054 31479745 ECH