Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1173 ATGGCTGAGAGAATTTACATAGCTGAAGAGGATAAGAGTGAAGGTAGTGGTGTTCAAGCCAAACCCTCTTCTCTAAGTCCTAAAAAACGTTCATTCTTTGACTTGAATGAAGATGCTGTGGAAGATGGAGATGACAGCATCAGTGATGATCAGATCAGTAACAATGACATGTCATCTCAAGAAGGAAATTTGAGTAGCAACAACTCTTGTGAAGAAGGGAAACGGAGAGCAACTACAGTTAGGCAATATGTGCGGTCCAAAATGCCAAGACTGCGTTGGACTCCTGATCTCCATCTAGCTTTTGTGCAGGCTGTTGAGAGGCTTGGTGGACAAGAAAGAGCAACACCCAAGTTGGTTCTCCAGTTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAGAGTCACTTGCAGATGTACCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTATCCCGAAATAGGGCAATGCAGGGAAGGCATCAAATTTTGGAGATGTACCAAAGATTTAATAATGCCCAAGGACACTTTGGGGTTGATAACTGTAGCTATATGCCATCATCTCTCCTAATGAAACAACCTCATGACATCAAAGCTCATGGTCCTTCAAGATGTCACCCGGCTGGGCTTTCCAATATTCACATGATTACAAGGTCAAGTTCGGTGTTGTGGGACAAAGATCATTCAAGATTATATGAGGCAAGCTCACATCTATTTGATGTAAGGGATGCAATAACAAGAAATGAACCTTTTAGACCTTGCCAGCTAATTGAAGAAATGAAGTGGCCTCCTCGGGCAATGGATGGATCACAAGAAAGCAACGATAAACATGAATTTTTAAGCATTTCTCGGGAAGACAAGTGTAGTGCAAAACCTTCTCCATGGAGCACCTACGCTGATTGTTTCAATAATCAATGTCATAGTTCTCGCAGTCCGATCTTCCCTGGCCACGCGAAGTTTGATGCTAAGGTTCATGATCTAAAAGACCAAAAGATAGAATTCACAAACGAGGTTCAAGTGTCACAGCAAGGCCATGTTAAACCCCAATTAGAAAGGATGAATGAGAAGAACCGGTCACCAAGTTTCCTGGAACTAAAGCTAAGCCAAGATTCAGGAAATCCAGAAAGTGAACAAGATATCAATACGAAGCTTTCTCTTTCCATATTCTCTTCCTCATCATCATCAAATGCAAGGCAACGAGCACAACGTAGTGAGAAGCACAAAGGCAATGTCCAGAATGGGGATTTGTGTTTACTAAATTGCGCACCAAGGAGTAGTTTGGGCTGA 1290 0.4225 MAERIYIAEEDKSEGSGVQAKPSSLSPKKRSFFDLNEDAVEDGDDSISDDQISNNDMSSQEGNLSSNNSCEEGKRRATTVRQYVRSKMPRLRWTPDLHLAFVQAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSRNRAMQGRHQILEMYQRFNNAQGHFGVDNCSYMPSSLLMKQPHDIKAHGPSRCHPAGLSNIHMITRSSSVLWDKDHSRLYEASSHLFDVRDAITRNEPFRPCQLIEEMKWPPRAMDGSQESNDKHEFLSISREDKCSAKPSPWSTYADCFNNQCHSSRSPIFPGHAKFDAKVHDLKDQKIEFTNEVQVSQQGHVKPQLERMNEKNRSPSFLELKLSQDSGNPESEQDINTKLSLSIFSSSSSSNARQRAQRSEKHKGNVQNGDLCLLNCAPRSSLG* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1173 429 MobiDBLite consensus disorder prediction 1 78 - -
Dod10g1173 429 Gene3D - 88 145 - -
Dod10g1173 429 SUPERFAMILY Homeodomain-like 87 143 IPR009057 -
Dod10g1173 429 Pfam Myb-like DNA-binding domain 91 141 IPR001005 -
Dod10g1173 429 MobiDBLite consensus disorder prediction 1 16 - -
Dod10g1173 429 MobiDBLite consensus disorder prediction 392 416 - -
Dod10g1173 429 MobiDBLite consensus disorder prediction 50 73 - -
Dod10g1173 429 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 145 IPR017930 -
Dod10g1173 429 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 31 411 IPR044848 GO:0003700
Dod10g1173 429 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 144 IPR006447 GO:0003677
Dod10g1173 429 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 31 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1173 Dod-Chr10 31385145 31388202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1173 80 148 G2-like Transcription Factor Family AT2G42660 81.159 5.48e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod10g1173 Myb_DNA-binding 2.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1173 - - lang:109337615 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1173 10 31385145 31388202 Dod10g1173 10 31385145 31388202 ECH