Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1164 ATGTCAGCCTCCGTAATTGAGGGGAATCATGAAGTTACTGGCCACATAATCTCAACCACAATTGGAGGCAAAAATGGTGAACCTAAACAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACAGGGGAGGCAGTGGCTATAAAGAAGGTTTTGCAGGACAGGCGGTACAAAAATCGTGAGCTGCAGTTAATGCGCTTGATGGATCACCCAAATGTAATTTCCCTGAAGCACTGTTTCTTCTCTACGACAAGCAAAGATGAACTTTTCCTGAACTTGGTAATGGAATATGTACCCGAAACGATGTACCGAGTTCTAAAGCACTACAGTAGTATGAACCAGAGAATGCCCTTAATTTATGTGAAATTATATACATATCAAATCTTCAGGGGACTTGCATATATCCATACCGTACCAGGAGTTTGCCATAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTTACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTCAAGGGTGAAGCAAACATTTCATACATATGTTCACGTTACTATCGGGCCCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCAGCTGGATGTGTCCTTGCAGAACTTCTTCTAGGCCAGCCACTATTCCCAGGAGATAATCAGGTGGATCAACTTGTGGAAATTATTAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGCTGCATGAACCCTAATTATACAGATTTTAGATTCCCCCAGATTAAAGCTCATCCTTGGCATAAGATTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCGAGGCTTCTCCAATATTCACCAAGTCTTCGATGTACTGCACTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGGGAGCCCAATGCTCGACTACCTAATGGTCGTCCACTGCCACCGCTTTTCAACTTTAAACAGGAATTAGCTGGAGCATCCCCTGAACTGATCAATAGACTCATCCCAGAGCATGTCAGGCGGCAAAGTGGTCTTGGCTTCCTGCATCCAAGTCCAACTAGCACATAA 1131 0.4332 MSASVIEGNHEVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGDNQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKIFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELAGASPELINRLIPEHVRRQSGLGFLHPSPTST* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1164 376 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
Dod10g1164 376 SMART serkin_6 34 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1164 376 Pfam Protein kinase domain 34 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1164 376 Gene3D Phosphorylase Kinase; domain 1 19 113 - -
Dod10g1164 376 CDD STKc_GSK3 29 321 IPR039192 -
Dod10g1164 376 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 2 366 - -
Dod10g1164 376 SUPERFAMILY Protein kinase-like (PK-like) 33 342 IPR011009 -
Dod10g1164 376 ProSiteProfiles Protein kinase domain profile. 34 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1164 376 PANTHER OS02G0236200 PROTEIN 2 366 - -
Dod10g1164 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Dod10g1164 376 Gene3D Transferase(Phosphotransferase) domain 1 114 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1164 Dod-Chr10 31286161 31289287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1164 38 356 MAP Kinase Gene Family AT3G59790 35.329 6.62e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dod10g1164 Pkinase 7.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1164 K14502 - qsu:111995841 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1164 10 31286161 31289287 Dod10g1164 10 31286161 31289287 ECH