Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1160 ATGTACCGTAGACTCAACAGCCGACCATTATATGTGGCTGACCCAGATGAGCCCGAGCCCGCCTCAGAAGCTGGGCCTGTCTCTCCTTCCTCCGGTGATGACACAAAAACTGAAGCACCATCACCTAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTAACAATACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAGACGTATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGCTCACCTTACCCCAGGGGATACTACCGATGCAGCAGCTCAAAGGGGTGCCCCGCAAGGAAGCAAGTTGAGCGAAGCCGCGTGGACCCCACCAAGCTCATCGTCACGTACGCCTACGAACACAACCACTCCATCCCCGTAACCAAATCCCAATCCTCCTCCGCCGCCGTCACCTCCACCATTAACGACGTCGCCGCGGCCACCTCCCCCTCCTCCTCCTCCTCCGGCGAAGGAAGGTTTCCACCGGAGGAGCTGAAGGTCTTCGCCAACCACCCCGATCTCGACCTCGCCGGCGACTCGGCGGTGCTGCTCATCCACCACCACCATGAGTTCGGATGGTTCGACGACGTGGTATCCGCCGGCGGCTTACTGGAGAGCCCGATCTGCGGCGGGGTGGAGGACGTGGCGCTGATGGCTGGGGAGGACGACGGGGAGGAGTCGCTGTTCGCCGGCCTCGGCGAGCTGCCGGAGTGCTCGGCGGTTTTCGGGAGGAGGAATATTCCGAGCGCCAGCGCGATCCAGTGCGGTGGAATCACAGGATAA 804 0.607 MYRRLNSRPLYVADPDEPEPASEAGPVSPSSGDDTKTEAPSPKKRREMKKRVVTIPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAYEHNHSIPVTKSQSSSAAVTSTINDVAAATSPSSSSSGEGRFPPEELKVFANHPDLDLAGDSAVLLIHHHHEFGWFDDVVSAGGLLESPICGGVEDVALMAGEDDGEESLFAGLGELPECSAVFGRRNIPSASAIQCGGITG* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1160 267 Gene3D WRKY domain 60 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod10g1160 267 MobiDBLite consensus disorder prediction 1 83 - -
Dod10g1160 267 SMART WRKY_cls 72 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod10g1160 267 PANTHER OS01G0750100 PROTEIN 16 262 - -
Dod10g1160 267 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 262 IPR044810 GO:0003700
Dod10g1160 267 Pfam WRKY DNA -binding domain 74 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod10g1160 267 SUPERFAMILY WRKY DNA-binding domain 68 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod10g1160 267 ProSiteProfiles WRKY domain profile. 73 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1160 Dod-Chr10 31226788 31230450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1160 1 254 WRKY Transcription Factor Family AT3G58710 47.126 1.05e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod10g1160 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1160 - - ahf:112707218 432.18