Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1153 ATGCAACCCCGTATAGAAGAATTAGAAAGGCGTCTCAAATTAAATTCAACGGATGATAAATTCCGAATTCTCGGAATCTGGGGCATGGGAGGAATAGGTAAGACAACTCATGCTAAGGTCTTATTCAACAAAGTTGCTTATCAATTTAATGCTAGCTGTTTTATCGAGGACATAAGCAAAATTTACAGAGAGGGTGGTGGCGCTACTGAAGTACAAAAAATAATTCTTCAGCAAACTGTAAGGGAACGAAGTCTGGAGATATACAGTCCTGACCGTATATATCGCACTGTACAAAGTAGGCTCTGTAACAAAAGCCTCCCTAAAAAGGTGCTTATAGTTCTTGACAATCTTGATGAACAAGAGCAATGGGATAAATTGGCTATAGATCCTCATTTACTTGGGAGAGGAAGCAGAGTTATTATAACTACTAGGAATGAGGACACTCTTGAAAAAATAGCGGATGAAATTTATGAGGTTCCACTATTAAATAATAGTGATGCTCGTAAACTGTTTTTAAGAATAACCCGCAAAAGCGACATTTCTAAGAGTGGTGAAGATATACTAGAATATGCTCAAAGTCTTCCACTTGCAATTGAAAAACTAGGGTACGCCTTCAAGCCCTTTGATGAAGAGTATTGGGAAGAAGCTTTGGAGCGCATGACAAAATATCCAGAAGATAAAATTATGGATGTGCTTCATAAAAGTTTTGAGGAACTAAACCCATATGAAAAAGAAATATTTTTGCATATAGCATGTTTCTTTGGAGGAAAAAGGGAGAAGTATGTGAAGCGCATTCTAGATAGTTGTGGAATGTCAGGCCATTGCCATGCAATTCAGCGGATTATGAAGAAATCACTTATAACCATTAGAAATCAGGAAATTCATATGCATAAAATGTTACAAGAATTGGGGAAGAATCTTGTTCGGAGACAATTTCCAGACGAGCCAGCATTATGGAGTAGATTGTGGCATCACAAGGATTTCGAGGATGTCTTGTTGTCAAAAAAGGAAACAAATAATGTTAAAGCCATAGTTTTGGATCAGGAAGAGGATGTCTCCAGATTCAGTCACTTGAGGATCGAAGGATTGTCAAAAATGAATGATCTTAAATTGCTCATATTACATCATAAAAAATTTTCAATGAACGACCTCGATCTTCTTTTAAACCAATTACAATATATTCTGTGGCATGGTTATCCTTTCTCTTCTATTTCATTATCTACATGGCGTAATCTTGTTGAATTGAATTTACCAAATAGCAGCATCGAGCAACTGTGGAAAGACAGACAGGAAATCCAGAATTTGAAAAAGCTGGATTTGAGCTTCTCGAAAAATCTTACGCAGACGCCAGATTTCCAATGTTGCCAAGGACTAGTGTGGCTAGATTTTACAGGATGCACAAATCTAACGCTGGTCCATGAATCAATTGGACGTCTTGAAAAACTTGGTTACTTGAGTTTGCGAGACTGTAGCAGTCTAGTGACTCTTGATCTCGGCACTAATTGCAAGTTAAGTTCTTTGAGAGTTCTACACCTGTCTGGCTGCACCTACCTTGAGAACACACCAGATTTTACAGGGATTTCAGAGCTTAAGTACCTTGATCTTGAACGGTGTACAAGTTTATCCACAGTTCATGAATCTATTGGGGCTCTTGCAACGCTTAAGTTCTTGAGTTTGAGAGGTTGCACAAATCTTGTTGAGATACCTCTGCATATCAACAACGTGACGTCCCTTTTGACTCTAGATTTGAGTGGCTGCCAAAATCTGAAGAATCTTCCTCTAGGACATAAAGTCATGTCTTCCTCCTGCCCAGAATCTTTGATATTTGTGGACCTTGGCTTCTACGAAATAAGAAGAGTCCCTAGTGCTATAAGAGAGTTGAGGTGTTTAGAAAGACTAAATCTAGCGAGAAGCTACTCTAGTTATGTAACTGATACTATCAAGAGTCTTTCGAAGCTAGCATATTTAAACTTGTCATTTGATATTCTTCATCCAGGGAGAGGCATTTTCGAACAGTATCCACATCGAATTGTCATTGGTCAGGAATATATATTTTCAGCTGCTACTAATTATGAATGGACTTGA 2085 0.3808 MQPRIEELERRLKLNSTDDKFRILGIWGMGGIGKTTHAKVLFNKVAYQFNASCFIEDISKIYREGGGATEVQKIILQQTVRERSLEIYSPDRIYRTVQSRLCNKSLPKKVLIVLDNLDEQEQWDKLAIDPHLLGRGSRVIITTRNEDTLEKIADEIYEVPLLNNSDARKLFLRITRKSDISKSGEDILEYAQSLPLAIEKLGYAFKPFDEEYWEEALERMTKYPEDKIMDVLHKSFEELNPYEKEIFLHIACFFGGKREKYVKRILDSCGMSGHCHAIQRIMKKSLITIRNQEIHMHKMLQELGKNLVRRQFPDEPALWSRLWHHKDFEDVLLSKKETNNVKAIVLDQEEDVSRFSHLRIEGLSKMNDLKLLILHHKKFSMNDLDLLLNQLQYILWHGYPFSSISLSTWRNLVELNLPNSSIEQLWKDRQEIQNLKKLDLSFSKNLTQTPDFQCCQGLVWLDFTGCTNLTLVHESIGRLEKLGYLSLRDCSSLVTLDLGTNCKLSSLRVLHLSGCTYLENTPDFTGISELKYLDLERCTSLSTVHESIGALATLKFLSLRGCTNLVEIPLHINNVTSLLTLDLSGCQNLKNLPLGHKVMSSSCPESLIFVDLGFYEIRRVPSAIRELRCLERLNLARSYSSYVTDTIKSLSKLAYLNLSFDILHPGRGIFEQYPHRIVIGQEYIFSAATNYEWT* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1153 694 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 517 660 IPR044974 GO:0006952
Dod10g1153 694 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 519 IPR044974 GO:0006952
Dod10g1153 694 Pfam Leucine Rich Repeat 411 428 IPR011713 -
Dod10g1153 694 PANTHER TMV RESISTANCE PROTEIN N-LIKE 517 660 - -
Dod10g1153 694 PANTHER TMV RESISTANCE PROTEIN N-LIKE 4 519 - -
Dod10g1153 694 Gene3D Ribonuclease Inhibitor 319 502 IPR032675 -
Dod10g1153 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 250 IPR027417 -
Dod10g1153 694 Gene3D - 161 240 IPR042197 -
Dod10g1153 694 SUPERFAMILY L domain-like 359 660 - -
Dod10g1153 694 Gene3D Ribonuclease Inhibitor 602 666 IPR032675 -
Dod10g1153 694 Gene3D Ribonuclease Inhibitor 503 601 IPR032675 -
Dod10g1153 694 Pfam NB-ARC domain 8 223 IPR002182 GO:0043531
Dod10g1153 694 PRINTS Disease resistance protein signature 104 118 - -
Dod10g1153 694 PRINTS Disease resistance protein signature 23 38 - -
Dod10g1153 694 PRINTS Disease resistance protein signature 191 205 - -
Dod10g1153 694 PRINTS Disease resistance protein signature 573 589 - -
Dod10g1153 694 Gene3D - 1 159 IPR027417 -
Dod10g1153 694 SUPERFAMILY "Winged helix" DNA-binding domain 226 332 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1153 Dod-Chr10 31035911 31038673 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1153 1 633 WRKY Transcription Factor Family AT4G12020 30.560 4.73e-60 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1153 - - aip:107614139 688.723