LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod10g1148	ATGACGGGATTGGCCAATTCAGCTGGTTGGGATGTCAGAGATAAGTCAGAATCTATTGAGATTGGAAGGATCGTTCAGCAGGTAATAAAGGCATTGAATCATAAATTCTCAAATGTGGATGACCTTGTTGGAATACAATCCCGTGTTGAAAAATTAGAAAAGCTTCTAAAATTAAGCTCAGAGGATGATGAGTTTCGAGTTTTAGGAATATGGGGGATGGCTGGCATAGGAAAGAAAGCTCATGCTACTGTCTTGTATGATAGAATCTCTTACCAGTTTGATGCTTGTTGTTTTATTGAAAACGTTAGCAAAATTTATAAGGATGGTGGTGTTTTGGCAATTCAAAAGCAAATTCTTCGTCAAACTCTAGATGAAAAGAATCTGGACACATACAGTCCTTCTGAAGTATCGGGGATTATAGCAAATAGACTCCACAACATAAAGGTCCTTGTAGCCCTTGAAAATGTTGATAAATTAGAGCAATTGCAAGAATTAGCTATAAATCCCAAATTGCTTGCTGCAGGAAGTAGAATAATAATAACCACGATGGATGAGCATATTTTGGAAGTGTATGGTGCAGATGAAGTTCATGAGGTTCCATTATTGAATAATGATGATGCTCGTGAACTTCTTTGTAGAAAAGCCTTCAAAACAGATTATCCAAGCAACAATTGTCAGCTTATGATTCCTGAGGTACTAAAATATGTTCAAGGTCTTCCTTTAGCAATTAGAGTATTGGGTTCTTTCTTGTATAGACGAGATGCTACCCAATGGAGAGATGCCTTGGATAGGCTGGGGAACAATCCTCCAAACGAAATTATGGATGTGCTACAAATAAGTTTCCATGGATTGCAATCAGAAGAGCAACAAATATTTCTGCACATTACTTGTTTCTTTAAAGGGGAGAGAGTGGAGTATGTAAAGAGAATTTTAGAAGTTTGTGAATTACATCCTCACATTGGAATTCCAAGAATTGCCGAAAAATCGCTCATAACTATTAGAAACCAAGAAATTCATGTGCATGACCTATTGCAAGAATTTGGAATGAACTTTGTTCGGCAAAAATTTCCTGGACAGCCAAGATTGTGGAGTAGATTGTGGCTTTATCAAGATTTTCATGATGCTTTGATGACAGATGAGGAACCAAACAATGTTGAAGCCATAGTTCTGGAACAAAAAGAGGATGTCTCCAAATATAATCAGCTGAGGGCTGCAGGATTGTCCAAAATGAGGGGCCTTAGACTACTGATATTATATCAGAACCTTACAGGAACCCTCAAATTTCTTCCTAATAGCCTACGATATATTTTTTGGCGTGGTTACCCGTTCTCTTCTCTGCTATTAAGTTATGAGCCGTATAATAGTCTCATGGAATTGAATATGCCTGATAGCAGCATCCAACATCTATGGAAAGGCCCCAAGCGTTTCCCGCGTTTGCAAAGGATGGATCTCAGCAACTCTAAGCACCTTTTGGAAACGCCAAATTTTGAATGGAGCCCAAATATTGTCCGGCTAGATTTCACAGGATGCACAAACTTGCAGCATGTCCACCAATCGATTGGACTTCTTCAACAACTTGCTTTTCTGAGTTTTCAAAACTGCAGCAATCTGGTCAGTCTTGATCTCGGCGCTCATTGTAAGCTATTTTCTATGAGAGTTCTACACCTCTCAGGCTGTACAAAGCTTAAGAACACGCCAGATTTTTCGGGGCTCTTAAACCTTGAGTACCTTGATCTTGAACAGTGTTCAAGTCTTTCCACAGTTCATGACTCTATTGGAGCCCTTGAATTGCTTAAATTTTTGAGTTTGAGAGGCTGCACACTCTGCTTAATACCCCCGCAAATTCAAAATCTGAGATCTCTCGTGACTCTGGATTTACGCGGCTGCGTGAAACTTGACAAAATCTCATCGATGGATTCTGACTATTTTGAATCATTGATAATTCTGGACCTTGGTTTCTGCGATCTACGTGACCTCCCTTCTACTTTTGGAGAATTAATGTGCTTAGAAAGACTAAATCTAGAAGGTAACAACTTTGTTTCAATGCCTTCTGCAATCAATCTGCTTTATAGTCTAGCATATTTAAACTTGTCCCATTGCAAGATGCTTGAACATTATCCTCGGGCCCCATTAGAAAATGCTTCGTCAGTGGGAAAGTATTTCAAATTAGTGTCTGGATCTCGTAATCACGGATCAGGATTTTACGCTTTCAACTGCCCCAACATAAAAAATTTTGGTTATCCCATTGAGGAGCTTCTGCAACCCACCGAATTTTCATGGCTAGAACGACTAGTTCGGGTGCGCAATGTCAGCCCGAGTCACTTCCGTGGTGGCTTTGGCATTGTTGTTTCAGGGACAGAAATTCCAAAGTGGTTTAAACATGAATTTGAGCCGGGATCAGCAATAAGGATAGTGCATTCTGATGTGAATGACAACTGGATCGGCTTTGCCTTCTGTGTAGCATTCGACATAAGCTATGGTTCACCAAATTCTGGTTCTTCGGATAATTCGTCTTCCTCGCAGCAGACACATCCTTTGTATCTTTCTTTTGAAGGTGAACACGTAGAAGAATGCTTCCATATGCCACTCCGTTTGGAACTGGACCAGATTCAGGGCTCAAAACAGGAACATCTCTGGCTTATCTATATCTCTCGACGACATTGTCATTTTGTGAAAACAGGGGCTCACATCACATTTAAAGCTCACTCGGGTTTGAATATAAGGAAGTGGGGGGAGATCTTACGAAGGAAACGTTTGAAACGATACAATGAGTGGAATGACGAGTACAATGAGTGGAATGATGGGGCTAATCAAGTCAACTGTCTTCCCTTTGTTGTTTGTGCATGTGAAAGCTACAACAGCTCAGCAGGGCCTAAAATTCAGCTTCCTTACAATTGGTTGGTTAGTGAGGAAGAGGAAAACGAGAAGATGATAGCAGAGCAGAAGGAAAATAGTTTCTCGAATGTGGGCCTTGAGATAGGCCAGCCAAGGCTTGGAATCAACCACTTCTTCTTCCTCTGGCTGAGCATATATCCATTGACGGAGAGCCGTTGCCCTCCATCAATGCTCTGGACGTTTCTGCATTCAAAGATTGACTTACCTGAGGGATATCCGATTGAGTATTAA	3126	0.4066	MTGLANSAGWDVRDKSESIEIGRIVQQVIKALNHKFSNVDDLVGIQSRVEKLEKLLKLSSEDDEFRVLGIWGMAGIGKKAHATVLYDRISYQFDACCFIENVSKIYKDGGVLAIQKQILRQTLDEKNLDTYSPSEVSGIIANRLHNIKVLVALENVDKLEQLQELAINPKLLAAGSRIIITTMDEHILEVYGADEVHEVPLLNNDDARELLCRKAFKTDYPSNNCQLMIPEVLKYVQGLPLAIRVLGSFLYRRDATQWRDALDRLGNNPPNEIMDVLQISFHGLQSEEQQIFLHITCFFKGERVEYVKRILEVCELHPHIGIPRIAEKSLITIRNQEIHVHDLLQEFGMNFVRQKFPGQPRLWSRLWLYQDFHDALMTDEEPNNVEAIVLEQKEDVSKYNQLRAAGLSKMRGLRLLILYQNLTGTLKFLPNSLRYIFWRGYPFSSLLLSYEPYNSLMELNMPDSSIQHLWKGPKRFPRLQRMDLSNSKHLLETPNFEWSPNIVRLDFTGCTNLQHVHQSIGLLQQLAFLSFQNCSNLVSLDLGAHCKLFSMRVLHLSGCTKLKNTPDFSGLLNLEYLDLEQCSSLSTVHDSIGALELLKFLSLRGCTLCLIPPQIQNLRSLVTLDLRGCVKLDKISSMDSDYFESLIILDLGFCDLRDLPSTFGELMCLERLNLEGNNFVSMPSAINLLYSLAYLNLSHCKMLEHYPRAPLENASSVGKYFKLVSGSRNHGSGFYAFNCPNIKNFGYPIEELLQPTEFSWLERLVRVRNVSPSHFRGGFGIVVSGTEIPKWFKHEFEPGSAIRIVHSDVNDNWIGFAFCVAFDISYGSPNSGSSDNSSSSQQTHPLYLSFEGEHVEECFHMPLRLELDQIQGSKQEHLWLIYISRRHCHFVKTGAHITFKAHSGLNIRKWGEILRRKRLKRYNEWNDEYNEWNDGANQVNCLPFVVCACESYNSSAGPKIQLPYNWLVSEEEENEKMIAEQKENSFSNVGLEIGQPRLGINHFFFLWLSIYPLTESRCPPSMLWTFLHSKIDLPEGYPIEY*	1042

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod10g1148	1041	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	642	887	IPR044974	GO:0006952
	Dod10g1148	1041	PANTHER	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	642	887	-	-
	Dod10g1148	1041	PRINTS	Disease resistance protein signature	67	82	-	-
	Dod10g1148	1041	PRINTS	Disease resistance protein signature	236	250	-	-
	Dod10g1148	1041	PRINTS	Disease resistance protein signature	616	632	-	-
	Dod10g1148	1041	PRINTS	Disease resistance protein signature	143	157	-	-
	Dod10g1148	1041	Gene3D	-	201	285	IPR042197	-
	Dod10g1148	1041	Gene3D	Ribonuclease Inhibitor	570	769	IPR032675	-
	Dod10g1148	1041	Gene3D	Ribonuclease Inhibitor	395	569	IPR032675	-
	Dod10g1148	1041	Pfam	C-JID domain	784	882	IPR045344	-
	Dod10g1148	1041	SUPERFAMILY	"Winged helix" DNA-binding domain	271	375	IPR036390	-
	Dod10g1148	1041	Pfam	NB-ARC domain	50	269	IPR002182	GO:0043531
	Dod10g1148	1041	Gene3D	-	25	195	IPR027417	-
	Dod10g1148	1041	PANTHER	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	40	563	-	-
	Dod10g1148	1041	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	40	563	IPR044974	GO:0006952
	Dod10g1148	1041	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	563	638	IPR044974	GO:0006952
	Dod10g1148	1041	PANTHER	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	563	638	-	-
	Dod10g1148	1041	SUPERFAMILY	L domain-like	407	712	-	-
	Dod10g1148	1041	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	36	295	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod10g1148	Dod-Chr10	30970182	30977943	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod10g1148	43	635	WRKY Transcription Factor Family	AT5G45050	30.269	7.24e-70	253

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod10g1148	-		-	adu:107462392	1036.17