Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1112 ATGACAATTCAGCAACATATGGGTGTCATAAAGGCTAGCTTTTGCATTGTTTTGGTTCTCAATGTTGTGGCAGTAGTCAGCACTGAAGAAGAGAAGGAAGCACGGGAAGAATTGCTTAGCCAACAATTTGATCCCACATTTGCACTTTTGGATGAGGACACGGCAGAGGTACTATGGACCACTTGCTGGGAAGTCTTGATTCATTCAAAGAAAGAACCTGGAGATCTAGACTTATGCCTCCCCCAGGAATTACCTAGTAACAATAATGGAATTAGTTCAGAAAGTGGATCAATAGCAAGAGAAAATATCCAAAATTTGATTAACACTTGCCACCCTCAGTTGAAGGAAAAGTTTCTTCACTGTTTGAGAAAACATAACCTTCCTTTCCACGTCTCTACAGAAGAACTTGACTCCAAGATCAGGCATGCTACTTATGTGGGATCACTTTCTTCCAGGAAAAAATTGGAACATGTTTCGCTTCAGCATGTATCAAAGCAACAGTACAATGGAGCACCACCACCACCCCCCAAAGCTAAAAGTGGGAAAATTAAAAAACCAGACTTCAAGTCTCCTTCTAAACCTGAGCGTAGTGGTAAAAAAAAGGCAGTTATTCTTGCCATAGTTATAACTGCAGTTATGACATCTGTAGTTGTGACCCTGTGTTTCTGTTGTTGTTGCCGGCATGGTCGAGTTAGACAACATGATGAGAAGCCCCTTCTCAGTATGAGCATGAGTGACCTCTCAGTTGGCTCTTCTTCCAACAATAATCCTCACAAGAGCTCAATGACAGATGAAAAACTTGGGTTTCAGTCATTAAGTAACAATTTGTCTGATGACAAGAAGAACTCAGTGCAAGAAGTTTGTAGTGCTGCTGCAAGGCCATCATTTGAGTTGAAACCTCCTCCTGGCAGGGTTGTTGGAACCATACCTTTGAAAGCTCCTCCTGGAAAGCTTGATCCTCTCCCACCAGAGCCACCTTCATTTGAGAATTCTAGTAATGCCACTGCTGCTACTACTGCTGCTGCTGCTCCTCCTCCTGCACCACCAAGGCCTAGTAATGGTGGACCTCCACCTCCTCCTGCACCTCTACTACCTGGAAAGGGTGGCCCTCCAGCTCCTCAGCCTCCTCCGCCACCTGGTCTCAAAGGCGGCCTGCGTCCACCGCCACCTCCTATGGGTGGTGCAGGCCCTCCCCGTGCCCCTCCTAGAGCCCCTCCACCAATTGGTGGAAAGGGGCCTAGACCTTTAGGCGGTGGAGCAAAGGGTCAAGGGAATGTTGGAGCTGGTTCAGAAGGTGGAGCTGATGCTCCTAAAGCCAAACTAAAGCCTTTCTTCTGGGATAAGGTTCAAGCCAACTCAGATCAAACAATGGTTTGGAATCAACTCACAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAGACACTTTTTGGCTATGCTTCTGTGGAAAAACATAAACCTGCACAGAAGAAAGAGTCTTCCTTCAACGATCAGTCACCTCAGTATATCCAGATCATTGAACCAAGGAAGGCACAAAATTTATCAATTCTGTTGCGAGCATTGAGTGTGACACTGGAAGAAGTTTGTGATGCGCTCCTTGAAGGAAATGAGCTACCCGCAGAATTCCTTCAAACCTTGTCGAGGATGGCACCAACTTCAGAGGAAGAACTTAAGCTTAGACTCTTCAGTGGGGACTTGTCCCTACTTAGTCCTGCTGATCGGTTCCTGAAGACCCTGGTTGACATTCCATTTGCTTTTAGACGAATTGAAACATTGCATTACATGTGCTCTGTTTCAGAGGAGCTTACTGCTACTAGGGAGTCTTTTGCAACTTTAGAGGTTGCTTGTAAGGAACTAAAAAGCAGCCGGCTATTCCTGAAGCTTCTTGAAGCAGTTCTCAAAACGGGCAACCGCATGAATGATGGTACATTCCGAGGTGGTGCACAAGCCTTCAAACTTGACACACTACTGAAACTGTCTGATGTAAAAGGAGTAGATGGAAAGACCACTCTCCTACTCTTTGTTGTCCAAGAGATAATCCGCACAGAGGGCATAAGAGCTGCACGCGTGGCCAAAGAGAGCCACAGCTTCTCAAGCATCAAAACAGATGACCTTCTTGAGGAAATCAACCATGAACCAGAAGACCACTACCGTGCACTTGGTCTTCAGGTTGTGTCCCGATTGAGCAGTGAGCTTGAGAATGTAAAGAAAGCAGCAGCACTAGATGCTGATGGCTTAACAGGAACCACTGCAAGGCTTGGCCAGGGTCTCGTAAAGATCAAAGAGTTTGTGAACAAGGACCTTAAGGATGTAGAGGGTGATAAAGGCTTTTATGAGGTGACAAAGAGTTTTGTGGAGAGTGCTGAGGCTGATGTGACAAGTTTGCTTGAAGAAGAGAAGAAGATCATGGCACTAGTGAAAAGCACTGGTGATTACTTTCATGGAAATACTGGGAGGGATGAAGGGTTGAGATTGTTTCTGATAGTGCGCGACTTCTTGATAATGGTGGATAAGGTGTGCAAGGAGATAAAGAATGCCCCAAAGAAGCCAGCAGCAGCAAGAAACTTGAAGCAAGAGAATCCTAGTAATCCTAGAGGAGGATCATCTTCCTCAGAAACAAGACCTCCACCTCCTGATTTTCGCCAGCGGCTTTATCCGGTAGCAGTAGATAGCAGGAGGATGGATGACTTCAGTTCAGATGATGACAGTCCATAG 2718 0.4573 MTIQQHMGVIKASFCIVLVLNVVAVVSTEEEKEAREELLSQQFDPTFALLDEDTAEVLWTTCWEVLIHSKKEPGDLDLCLPQELPSNNNGISSESGSIARENIQNLINTCHPQLKEKFLHCLRKHNLPFHVSTEELDSKIRHATYVGSLSSRKKLEHVSLQHVSKQQYNGAPPPPPKAKSGKIKKPDFKSPSKPERSGKKKAVILAIVITAVMTSVVVTLCFCCCCRHGRVRQHDEKPLLSMSMSDLSVGSSSNNNPHKSSMTDEKLGFQSLSNNLSDDKKNSVQEVCSAAARPSFELKPPPGRVVGTIPLKAPPGKLDPLPPEPPSFENSSNATAATTAAAAPPPAPPRPSNGGPPPPPAPLLPGKGGPPAPQPPPPPGLKGGLRPPPPPMGGAGPPRAPPRAPPPIGGKGPRPLGGGAKGQGNVGAGSEGGADAPKAKLKPFFWDKVQANSDQTMVWNQLTAGSFQFNEEMMETLFGYASVEKHKPAQKKESSFNDQSPQYIQIIEPRKAQNLSILLRALSVTLEEVCDALLEGNELPAEFLQTLSRMAPTSEEELKLRLFSGDLSLLSPADRFLKTLVDIPFAFRRIETLHYMCSVSEELTATRESFATLEVACKELKSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLLFVVQEIIRTEGIRAARVAKESHSFSSIKTDDLLEEINHEPEDHYRALGLQVVSRLSSELENVKKAAALDADGLTGTTARLGQGLVKIKEFVNKDLKDVEGDKGFYEVTKSFVESAEADVTSLLEEEKKIMALVKSTGDYFHGNTGRDEGLRLFLIVRDFLIMVDKVCKEIKNAPKKPAAARNLKQENPSNPRGGSSSSETRPPPPDFRQRLYPVAVDSRRMDDFSSDDDSP* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1112 905 PANTHER FORMIN-RELATED 182 398 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod10g1112 905 SMART it6_source 431 852 IPR015425 -
Dod10g1112 905 MobiDBLite consensus disorder prediction 180 196 - -
Dod10g1112 905 ProSiteProfiles Formin homology-2 (FH2) domain profile. 431 863 IPR015425 -
Dod10g1112 905 MobiDBLite consensus disorder prediction 887 905 - -
Dod10g1112 905 MobiDBLite consensus disorder prediction 160 196 - -
Dod10g1112 905 PANTHER FORMIN-LIKE PROTEIN 384 903 - -
Dod10g1112 905 SUPERFAMILY Formin homology 2 domain (FH2 domain) 444 851 - -
Dod10g1112 905 MobiDBLite consensus disorder prediction 342 412 - -
Dod10g1112 905 PANTHER FORMIN-RELATED 384 903 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod10g1112 905 PANTHER FORMIN-RELATED 1 175 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod10g1112 905 Gene3D Formin, FH2 domain 436 867 IPR042201 -
Dod10g1112 905 MobiDBLite consensus disorder prediction 857 877 - -
Dod10g1112 905 MobiDBLite consensus disorder prediction 848 905 - -
Dod10g1112 905 MobiDBLite consensus disorder prediction 245 264 - -
Dod10g1112 905 Pfam Formin Homology 2 Domain 435 837 IPR015425 -
Dod10g1112 905 MobiDBLite consensus disorder prediction 295 436 - -
Dod10g1112 905 PANTHER FORMIN-LIKE PROTEIN 1 175 - -
Dod10g1112 905 PANTHER FORMIN-LIKE PROTEIN 182 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1112 Dod-Chr10 30467194 30473665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1112 411 845 FH2 protein (formin) Gene Family AT5G67470 48.874 5.13e-120 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1112 - - gmx:100792872 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1112 10 30467194 30473665 Dod03g1947 03 43457907 43465152 PCT