Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1110 ATGCCAACAGTGTGGTTCTCTTTGAAGAAGTCTCTACACTGCAAATCAGAGCCATCAGATGTTCATGACCCAAAATCAAGGAAGCACTTGAGCACAATCTTGACCAAGAGGGCATCAGGGAGGTCAGGGTGTTCAAGGTCCATAGCAAATCTCAAGGATGTCATCCATGGAAGCAAGAGGCACATAGAGAAGCCACCTACTTGCAGCCCAAGATCCATAGGGAGCAGTGAGTTCCTCAACCCAATAACACATGAAGTTATCTTGAGCAACTCAAGGTGTGAGCTGAAAATCACTGGCTATGGAGGATTCCAAGAAGGGGTTGGCAGTGGTGCTGGTGCTAGTGGTGGTAATAATGGTGGTGGAGCTCGTGGTGATTCAACCTTCGTGGGAACTTTAAGGCCTGGGACTCCTGGCCCTGGAGGGCACCCTACAATGCATTACTTTAACCCTTCTTTTAGGACTTCAACCACTCCACCAAGGAAATCTCCTTTGCTATTATCAGACAAAGAAGGGTCTGGCTTGCATGGTGTAGGACTTCATTCAAGCAATAGGTTGTCTCTTGAGACAGATTCCAATGGTTCTTGCACTGTCACTTGTCACAAATGTGGAGAGCAATTTACCAAATGGGAAGCTGCTGAAACTCACCATCTTTCCAAGCATGCTGTTACTGAACTTGTGGAAGGTGATTCATCAAGAAAAATAGTGGAGATAATATGCAGGACTAGCTGGCTGAAGTCTGAGAACCAATGTGGGAGAATTGAAAGAGTCTTGAAAGTACACAACATGCAGAAGACTCTAGCAAGGTTTGAAGAGTACAGGGAGATAGTGAAAATCAAAGCCAGCAAGCTCCAAAAGAAGCATCCGAGGTGCCTTGCTGATGGGAATGAGCTCTTGAGGTTCTATGGCACCACTGTTGCATGCTCTCTTGGCCTCAATGGCTCTTCAAGCCTATGTTTATCTGAGAAATGCTGTGTTTGTAGGATCATAAGAAATGGTTTTTCAGCCAAGAAGGAGCTCAAGGGTGGAATAGGTGTTTTCACCACTTCCACAAGTGGAAGGGCTTTTGAATCCATTGAGGTTTTTGACCATGACCCTTCACTAAGAAAGGCATTGATAGTGTGCAGGGTTATTGCTGGCAGGGTTCATAGGCCTCTGGAAAACATTCAGGAGATGGCAGGTCAAACAGGATTTGATTCATTAGCTGGGAAGGTTGGCCTTTATTCAAACATTGAAGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTAATTTGCAAACCCTGA 1296 0.4529 MPTVWFSLKKSLHCKSEPSDVHDPKSRKHLSTILTKRASGRSGCSRSIANLKDVIHGSKRHIEKPPTCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGAGASGGNNGGGARGDSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSTTPPRKSPLLLSDKEGSGLHGVGLHSSNRLSLETDSNGSCTVTCHKCGEQFTKWEAAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREIVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEVFDHDPSLRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1110 431 MobiDBLite consensus disorder prediction 111 141 - -
Dod10g1110 431 ProSitePatterns Zinc finger C2H2 type domain signature. 199 220 IPR013087 -
Dod10g1110 431 SUPERFAMILY ADP-ribosylation 222 430 - -
Dod10g1110 431 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 431 - -
Dod10g1110 431 Gene3D - 212 430 - -
Dod10g1110 431 PANTHER - 2 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1110 Dod-Chr10 30452326 30455060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1110 1 431 C2H2 Transcription Factor Family AT5G54630 69.892 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod10g1110 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1110 - - gmx:100787790 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1110 10 30452326 30455060 Dod10g1110 10 30452326 30455060 ECH