Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1107 ATGAGGGACGAGTCAACAGGACTGATCATAGGGATCTCCATAGGTGTGGTTATTGGTGTTGTTTTGGCGATTTCTGCACTTTTCTGCTTTAGGTACCATAGGAAGCGATCGCAGATAGGGAATAGCAGTTCCAGGAGGGCAGCTACCATACCTATCCGTGCAAATGGTGCTGATTCATGTACCATTCTGTCAGACTCAACCTTAGGTCCAGAATCACCTGTGAAGTCCGGGCGTAATGGCATGTCCTTCTGGTTTGATGGATTTAAGAAGAGTAGCATGGTTTCATCATCTGGTATTCCGGAATATTCATACAAGGATTTGCAGAAGGCAACCTATAACTTTACAACACTCATAGGACAAGGTGCATTCGGTCCTGTTTATAAAGCTCAGATGTCAACTGGCGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAGGGGGAGAAAGAATTTCACACAGAGGTAATGTTGTTGGGAAGGTTACACCACAGAAACCTGGTCAATTTGATTGGATACTGTGCAGAAAAGGGGCAACGTATGCTTGTATATGTATACATGAGTAAAGGCAGCTTGGCTTCCCACTTGTATAGCGAAGAGAATGGGACGCTGGGCTGGGATTTGAGGGTTCATATAGCTTTAGATGTGGCAAGAGGCTTGGAGTATCTTCATGATGGAGCAGTTCCTCCTGTAATCCATAGAGATATCAAGTCTTCCAATATACTGTTGGACCAGTCCATGAGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGGTGGTGGATAAACAGGCAGCTATTCGAGGTACCTTTGGTTACCTTGACCCTGAGTACATATCTTCAGGGACATTCACTAAGAAAAGTGATGTATACAGTTTCGGGGTATTGCTCTTCGAACTCATAGCTGGTAGAAATCCTCAGCAGGGTCTTATGGAATATGTTGAGCTTGCAGCAATGAACAGTGAGGGAAAAGTGGGTTGGGAGGAGATCGTTGATTCAAGGCTAGAGGGAAAATGTGATTTCCAAGAGCTCAATGAAGTGGCAGCCCTTGCCTACAAATGCATCAACCGCGCCCCAAGGAAGCGCCCTTCCATGAGGGACATAGTGCAAGTGTTGACAAGGGTCCTTAAGTCAGGGCACCATAGGAATCATCATCACAAGAAGTCCTTGTCAGCTACAGCAGATGAAGTTTCCATTGATGTTGATCATCCAGACACCAAGGTTCCTATTGCTGACCACAGGAGAGATGAGTCTATAGATAGTGCAGCTGGCATGTATGATTTGTAG 1293 0.4517 MRDESTGLIIGISIGVVIGVVLAISALFCFRYHRKRSQIGNSSSRRAATIPIRANGADSCTILSDSTLGPESPVKSGRNGMSFWFDGFKKSSMVSSSGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLIGYCAEKGQRMLVYVYMSKGSLASHLYSEENGTLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEVVDKQAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNSEGKVGWEEIVDSRLEGKCDFQELNEVAALAYKCINRAPRKRPSMRDIVQVLTRVLKSGHHRNHHHKKSLSATADEVSIDVDHPDTKVPIADHRRDESIDSAAGMYDL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1107 430 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Dod10g1107 430 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Dod10g1107 430 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1107 430 SUPERFAMILY Protein kinase-like (PK-like) 101 388 IPR011009 -
Dod10g1107 430 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1107 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Dod10g1107 430 PANTHER OS01G0253100 PROTEIN 7 404 IPR045271 GO:0004714|GO:0006468
Dod10g1107 430 Gene3D Transferase(Phosphotransferase) domain 1 188 402 - -
Dod10g1107 430 CDD STKc_IRAK 118 376 - -
Dod10g1107 430 MobiDBLite consensus disorder prediction 380 399 - -
Dod10g1107 430 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 7 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1107 Dod-Chr10 30423070 30427979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1107 24 374 Glycoside Hydrolase AT3G07070 40.000 8.25e-76 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Dod10g1107 PK_Tyr_Ser-Thr 5.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1107 - - gmx:100799586 764.607