Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1106 ATGGACTCGCAACAGCTTTTCAGTTTCAGTGTGACAAGTGCAGGACTACCTTACATGCCATCTTTTCCAACAATTCCATCCCAACGCAACGGGCTTATTGGATCCGTAAAATTTGACACAGGAAACTCACCTAATTCCCCCTTTTCAACTCATTTCGATTCTGATACCCTTTCTGCTTTGAGTGACAGCCAGGAGCAGCACAGCCCTGGGGAAATCCTCTCCGGTGTTAGCCCCTCCAGTAACTCTTCACTGGAAGCCAATCATTATTTGCATAGATTGGTCTCATCCGCCGACAGTTGCAGAGACAGTTTGCAACTATATTCTGCCAGGAGCTCTCTCCTGCAGAATGCAAACTGTAACCAGAAAATCAGAAACGTGTTGCTGGAACTAGAAACTGCTCTCATGGCTCCTGATGATTATGAGGGCAGCACATCAAATATTTCTTTGGCAGAGAGCAGCCAGCCGACGACATCTGGTCAAAGATATAGGTCCTGGAGCCATGATCACCAGGGATCACAAATTATTCAAAGTCAGCCATCTTATGGTACTAGCAGTAGGCAGTCAAGCGACTTTGTACATGTTGTGAAAAGGCAAAAATCGATGGAGGAAGCATCCCTGCAAGGGTTCCCATCAGGCAATTTGAAACAATTGCTGGTTGCATGTGCCAAAGCCATGTCTGAAGGCAACATGAAAGATTTTGATCAATTGATAGCAAAGGCAAAAGGTGCTGTTTCAATTAGCGGGGAGCCGATCCAGCGACTTGGTGCTTATATGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCATCGGGGATTAGCATCTATCATGCCCTTAAATGCAGAGAGCCAGAAGGCAAAGACTTACTCTCTTACATGCAAATGCTGTTTGAAATCTGCCCCTACCTAAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCTGAAGCATGCAGAAATGAGAATCACATCCACATCATAGACTTTCAGATTGCTCAGGGAACTCAATGGATGACTCTCCTTCAAGCTCTTGCAGCAAGACCTCGCGGACCACCCCATGTGAGGATCACAGGGATCGATGACCCCATGAGTAGATATGCTCGTGGTGATGGACTGGAAGTAGTTGGGAAAAGGTTAGCTGCGATGTCTGAGGAATTTGGCATCAAAGTTGAGTTTCATGGAGTGCCAGTTTATGCTCCAGATGTGACAAGAGATATGCTAGATATCAGGCCTGGTGAGGCTTTGGCTGTCAACTTCCCTTTGCAACTCCACCATACAGCTGATGAGAGTGTTGATGTGAACAACCCAAGGGATGGACTTCTGAGATTGGTGAAGTCACTCTCCCCCAAGGTGGTAACATTGGTGGAGCAGGAATCTAAAACAAACACAACTCCTTTCTTCAACAGGTTTATGGAGACCCTAGATTACTACTTGGCAATTTTTGAGTCCATTGATGTCACCCTCCCAAGAAATAGCAAGGAGAGGATTAATGTGGAGCAACATTGTCTTGCCAGGGACATTGTGAATGTCATTGCTTGTGAAGGGAAGGAAAGGGTGGAGAGGCATGAATTGTTTGGCAAGTGGAAGTCTAGGTTGACAATGGCTGGCTTCCGCCAATACCCTTTGAGCACTTACGTGAATTCTGTTATAAGAAGCCTCCTGAGGTGCTATTCTGAACATTATACACTAGTGGAGAAAGATGGGGCCATGCTGTTGGGGTGGAAGAACAGGAATTTGATATCAGCTTCAGCATGGCAATGA 1755 0.4604 MDSQQLFSFSVTSAGLPYMPSFPTIPSQRNGLIGSVKFDTGNSPNSPFSTHFDSDTLSALSDSQEQHSPGEILSGVSPSSNSSLEANHYLHRLVSSADSCRDSLQLYSARSSLLQNANCNQKIRNVLLELETALMAPDDYEGSTSNISLAESSQPTTSGQRYRSWSHDHQGSQIIQSQPSYGTSSRQSSDFVHVVKRQKSMEEASLQGFPSGNLKQLLVACAKAMSEGNMKDFDQLIAKAKGAVSISGEPIQRLGAYMVEGLVARKEASGISIYHALKCREPEGKDLLSYMQMLFEICPYLKFGYMAANGAIAEACRNENHIHIIDFQIAQGTQWMTLLQALAARPRGPPHVRITGIDDPMSRYARGDGLEVVGKRLAAMSEEFGIKVEFHGVPVYAPDVTRDMLDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVVTLVEQESKTNTTPFFNRFMETLDYYLAIFESIDVTLPRNSKERINVEQHCLARDIVNVIACEGKERVERHELFGKWKSRLTMAGFRQYPLSTYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWQ* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1106 584 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 584 - -
Dod10g1106 584 ProSiteProfiles GRAS family profile. 205 584 IPR005202 -
Dod10g1106 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 584 IPR005202 -
Dod10g1106 584 MobiDBLite consensus disorder prediction 44 79 - -
Dod10g1106 584 MobiDBLite consensus disorder prediction 144 186 - -
Dod10g1106 584 Pfam GRAS domain family 214 584 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1106 Dod-Chr10 30396125 30397879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1106 205 584 GRAS Transcription Factor Family AT1G50600 61.579 3.30e-174 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod10g1106 GRAS 2.4e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1106 - - adu:107462432 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1106 10 30396125 30397879 Dod10g1106 10 30396125 30397879 ECH
Dod10g1106 10 30396125 30397879 Dod03g1942 03 43330221 43334025 PCT