Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1097 ATGGCAATGAGGGCTGCGGCGGCGGCGGCACCGCGAGGCTTAAAACGGCTGTTCTGTAGCACTCCGCCGTCGGCTATTGCTGCGGCTTCTGCTTCACAGACGGCGGAGCCCAACACCACCCTCTTCGTTTCCGGGCTTAACAAACGTACGACCTCAGCGAGGCTACTTGAAGAATTTTCCAAGTTTGGTGATGTTGTTCATGCTAGGGTGGTAACTGATAGAGCATCAGGTTACTCTAAAGGGTTTGGTTTTGTACAATATGCTACTATAGAAGAGGCTTCAAAGGGCATTGAAAGCATGGATGGAAAGTTTCTGGATGGTTGGGTTATATTTGCAGAGTATGCAAGACCAAGACCAATGCCTGGACAGCCTGTAAATAATATGTCCCCTCGGTATGGCCGGCCCAGTAGAGGTCGGTAA 420 0.5071 MAMRAAAAAAPRGLKRLFCSTPPSAIAAASASQTAEPNTTLFVSGLNKRTTSARLLEEFSKFGDVVHARVVTDRASGYSKGFGFVQYATIEEASKGIESMDGKFLDGWVIFAEYARPRPMPGQPVNNMSPRYGRPSRGR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1097 139 MobiDBLite consensus disorder prediction 119 139 - -
Dod10g1097 139 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 1 133 - -
Dod10g1097 139 SUPERFAMILY RNA-binding domain, RBD 28 138 IPR035979 GO:0003676
Dod10g1097 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 107 IPR000504 GO:0003723
Dod10g1097 139 PANTHER TRANSFORMER-2-RELATED 1 133 - -
Dod10g1097 139 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Dod10g1097 139 SMART rrm1_1 40 113 IPR000504 GO:0003723
Dod10g1097 139 Gene3D - 25 139 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1097 Dod-Chr10 29881880 29884817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1097 22 119 Eukaryotic Initiation Factors Gene Family AT3G11400 32.692 2.11e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1097 - - zju:107431313 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1097 10 29881880 29884817 Dod10g1097 10 29881880 29884817 ECH