Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod10g1097 | ATGGCAATGAGGGCTGCGGCGGCGGCGGCACCGCGAGGCTTAAAACGGCTGTTCTGTAGCACTCCGCCGTCGGCTATTGCTGCGGCTTCTGCTTCACAGACGGCGGAGCCCAACACCACCCTCTTCGTTTCCGGGCTTAACAAACGTACGACCTCAGCGAGGCTACTTGAAGAATTTTCCAAGTTTGGTGATGTTGTTCATGCTAGGGTGGTAACTGATAGAGCATCAGGTTACTCTAAAGGGTTTGGTTTTGTACAATATGCTACTATAGAAGAGGCTTCAAAGGGCATTGAAAGCATGGATGGAAAGTTTCTGGATGGTTGGGTTATATTTGCAGAGTATGCAAGACCAAGACCAATGCCTGGACAGCCTGTAAATAATATGTCCCCTCGGTATGGCCGGCCCAGTAGAGGTCGGTAA | 420 | 0.5071 | MAMRAAAAAAPRGLKRLFCSTPPSAIAAASASQTAEPNTTLFVSGLNKRTTSARLLEEFSKFGDVVHARVVTDRASGYSKGFGFVQYATIEEASKGIESMDGKFLDGWVIFAEYARPRPMPGQPVNNMSPRYGRPSRGR* | 140 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod10g1097 | 139 | MobiDBLite | consensus disorder prediction | 119 | 139 | - | - | |
Dod10g1097 | 139 | PANTHER | GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE | 1 | 133 | - | - | |
Dod10g1097 | 139 | SUPERFAMILY | RNA-binding domain, RBD | 28 | 138 | IPR035979 | GO:0003676 | |
Dod10g1097 | 139 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 41 | 107 | IPR000504 | GO:0003723 | |
Dod10g1097 | 139 | PANTHER | TRANSFORMER-2-RELATED | 1 | 133 | - | - | |
Dod10g1097 | 139 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 39 | 117 | IPR000504 | GO:0003723 | |
Dod10g1097 | 139 | SMART | rrm1_1 | 40 | 113 | IPR000504 | GO:0003723 | |
Dod10g1097 | 139 | Gene3D | - | 25 | 139 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod10g1097 | Dod-Chr10 | 29881880 | 29884817 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod10g1097 | 22 | 119 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 32.692 | 2.11e-12 | 60.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod10g1097 | - | - | zju:107431313 | 184.496 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod10g1097 | 10 | 29881880 | 29884817 | Dod10g1097 | 10 | 29881880 | 29884817 | ECH |