Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1089 ATGGCAGATGATCAATTTCAGGCAACTGGGAACTGGTGGGAATCAGCAACAAGGAACAACAACGTGAGGTATGAGAGTGGGGCATCACAGTCTTCATCCTCTGGGATCACCAACTTAGGCAACTTTGCTAATTGGCAGCAACAACAACAACAACAACAACAACAACGACAACCAGATCATCATGTGGCAGAACACATGAAGCCAAGGACTTCCATGGATTCAGGTGGTTCCCCTGTGGTTTTCCATGACCCCCACAAGCTTCACCCTCCAGATTCTGCCACTTCCACTGACCCCAACTTGCACATGATGGGTTTAGGCCTCTCTTCCCCATCCATGGATTGGGATCAACCATCCTTGCTGCGAGGTGAGAAGGCTGCAGAGAACAGTTTCAGGTCGATGCTGCAAGAGAGTGGCGGGATGGGGCTGTCTCAAGTTCAATGGAGGGACCCTTCTGCTTCAGGCAACGATCAGTTCAAGCAAGTGAATAAAGGTTTCTCTTTGGACCAAAACCAGTTCAGCCCTCAGTATAGCTCTGGGGACAGCACTGTCACAAGCCAAGGCTTGCATCATCAATCCAGTTTCCATCAGAACATTGATTCCTCAGCTTTGTATGGGAGCCCTTCATCAATATTGATGCAAGGACTATTGGGGCCTGAAAATAACCAACAAGCTAATTCCATGAATTTTCCATACCCATCAATAAGCTATGGGTTGAGCTCTAACAATAATGAGCTGGTGCCTAATTCTTGGTCTAAAGCTCCTCAGTTCTTGAGAGCTTCACCACCAAAGCAATTGCCGCCACCACCACCCAATAACCACTTGCATTTCACCAACAACGCTCCCTTTTGGAACGCCTCTGAGGCTTCTGCCATCAAAGATGTTCGGTCCAGCTTCTTCCCTTCATCGCAAACCCCATTCTCCACCACTCCAAATTTTGATGTACAATCAAAGAATATGTCTGAAGTGAGGGACTCGGGTGCTGTGGTGAAGAAAAGTGGGAGTGAGCAAGCACACAAAAGGCCTCGGAACGAAACTACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTGTCGCCTTTCGGAAAGACTGATACAGCCTCAGTGCTATCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAGGTCACAGTTTTAAGTAACCCGTACATGAAAAGTGGAGCTCCAGTACAGATTCAACAGAGTTCTGGTAAGTCCAAGGAAGGTGAGGGTACAAAACAAGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCGGTTTCAAGCACATTTCCAGTGGCTCATGAAACCACGGTTGATTTCTGGACGCCAACATTCGGAGGTGGCTCCAGATAA 1395 0.4767 MADDQFQATGNWWESATRNNNVRYESGASQSSSSGITNLGNFANWQQQQQQQQQQRQPDHHVAEHMKPRTSMDSGGSPVVFHDPHKLHPPDSATSTDPNLHMMGLGLSSPSMDWDQPSLLRGEKAAENSFRSMLQESGGMGLSQVQWRDPSASGNDQFKQVNKGFSLDQNQFSPQYSSGDSTVTSQGLHHQSSFHQNIDSSALYGSPSSILMQGLLGPENNQQANSMNFPYPSISYGLSSNNNELVPNSWSKAPQFLRASPPKQLPPPPPNNHLHFTNNAPFWNASEASAIKDVRSSFFPSSQTPFSTTPNFDVQSKNMSEVRDSGAVVKKSGSEQAHKRPRNETTPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSNPYMKSGAPVQIQQSSGKSKEGEGTKQDLRSRGLCLVPVSSTFPVAHETTVDFWTPTFGGGSR* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1089 464 MobiDBLite consensus disorder prediction 306 352 - -
Dod10g1089 464 CDD bHLH_AtbHLH_like 350 401 IPR045239 -
Dod10g1089 464 SMART finulus 355 399 IPR011598 GO:0046983
Dod10g1089 464 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 408 IPR036638 GO:0046983
Dod10g1089 464 MobiDBLite consensus disorder prediction 45 97 - -
Dod10g1089 464 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 453 - -
Dod10g1089 464 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 18 453 - -
Dod10g1089 464 Gene3D - 354 412 IPR036638 GO:0046983
Dod10g1089 464 MobiDBLite consensus disorder prediction 410 430 - -
Dod10g1089 464 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 344 393 IPR011598 GO:0046983
Dod10g1089 464 MobiDBLite consensus disorder prediction 306 322 - -
Dod10g1089 464 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1089 Dod-Chr10 29761868 29765250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1089 121 464 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 44.444 7.58e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1089 - - gmx:100778697 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1089 10 29761868 29765250 Dod10g1089 10 29761868 29765250 ECH