Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1082 ATGGACCATCACGAGGAAGATCTAGAATTACCCTTGTTTGACATGTCTACAATTACTTTTGCAACCAATAACTTTTCAACTGACAACATATTGGGGGAAGGTGGTTTTGGACCAGTTTATAAGGGTATCCTTGAAGATGGACGAGAAATAGCAGTCAAGAGGCTTTCAGAGAATTCAAGTCAAGGACTCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAACACAGGAATTTAGTTAAGCTACTAGGATGCTGCATTCAAGAAGATGAAAGCTTGTTGGTTTATGAATTTATGCCAAATAAGAGCTTGGACTTCTTCATATTTGGTTTGGTTCCCAAAAACCCTTATGCATTGCTTGATTCACTTTGCATCGCTTATTAG 390 0.3769 MDHHEEDLELPLFDMSTITFATNNFSTDNILGEGGFGPVYKGILEDGREIAVKRLSENSSQGLQEFKNEVMHIAKLQHRNLVKLLGCCIQEDESLLVYEFMPNKSLDFFIFGLVPKNPYALLDSLCIAY* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1082 129 Pfam Protein tyrosine and serine/threonine kinase 27 110 IPR001245 GO:0004672|GO:0006468
Dod10g1082 129 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 114 - -
Dod10g1082 129 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 6 114 - -
Dod10g1082 129 SUPERFAMILY Protein kinase-like (PK-like) 9 116 IPR011009 -
Dod10g1082 129 ProSiteProfiles Protein kinase domain profile. 25 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1082 129 Gene3D Phosphorylase Kinase; domain 1 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1082 Dod-Chr10 29523725 29524849 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1082 13 111 Receptor kinase-like Gene Family AT4G11480 63.636 3.83e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g1082 PK_Tyr_Ser-Thr 1.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1082 - - ahf:112769704 189.119