Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1080 ATGAAGAATTGCAACTGCACAGCTTATACAGCTCTGGATATTAAGAAAGGTGGGTGCTTACTCTGGTTTGGTAATATCAGGGATATGAAAGAGATAACTGAATCCAGTGAAGATATTTATATAAGGTTGGCTGCGACAGAAATAGCTTTCTTATCAAAAGCCACTGAAAAAGCAAAATCACATAAATCCAACATCCAGAAGAAAAAGACTATCATCATCAGCTGTGTGTTGCCTTTAGGAGTTTTAATTCCATGCTCCGCCTTCATCATTTATAAATGGAAGACACGGCAAAAGGGCAGAAAGATGAAAGGCGATCCAAAAAGAAAAGCAAGTGCAATGAATGACCACCATGAGGAAGATCTTCAACTACCCTTGTTTGATATGTCCACAATTACTTTTGCAACCAATAATTTTTCAATTAACAACATACTGGGGAGAGGTGGCTTTGGATCGGTTTATAAGGGTATCTTAGAAGATGGAAGAGAAATAGCTATCAAAAGGCTATCAAAGAATTCAAGCCAAGGACTCCAAGAGTTTAAAAATGAAGTTATGCATGTTGTCAAACTCCAACACAAGAATTTAGTGAAGCTACTAGGATGTTGCATTCAAGAAGAAGAAAGATTGTTGGTTTATGAATTTATGCCCAATAAAAGCTTGGACTTTTTCATATTTGGTTTGACTCCTACAAAGCTTATGCATTGTTTAATTCCCTTGCAGTTGTATTCTCATTTAGTGAATAGACTTTTTGTTTGA 753 0.3612 MKNCNCTAYTALDIKKGGCLLWFGNIRDMKEITESSEDIYIRLAATEIAFLSKATEKAKSHKSNIQKKKTIIISCVLPLGVLIPCSAFIIYKWKTRQKGRKMKGDPKRKASAMNDHHEEDLQLPLFDMSTITFATNNFSINNILGRGGFGSVYKGILEDGREIAIKRLSKNSSQGLQEFKNEVMHVVKLQHKNLVKLLGCCIQEEERLLVYEFMPNKSLDFFIFGLTPTKLMHCLIPLQLYSHLVNRLFV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1080 250 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
Dod10g1080 250 ProSiteProfiles Protein kinase domain profile. 138 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1080 250 SMART tyrkin_6 138 249 IPR020635 GO:0004713|GO:0006468
Dod10g1080 250 Gene3D Phosphorylase Kinase; domain 1 111 213 - -
Dod10g1080 250 Pfam PAN-like domain 2 29 IPR003609 -
Dod10g1080 250 SUPERFAMILY Protein kinase-like (PK-like) 116 230 IPR011009 -
Dod10g1080 250 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 2 226 - -
Dod10g1080 250 CDD PAN_AP_plant 1 44 - -
Dod10g1080 250 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 226 - -
Dod10g1080 250 Pfam Protein tyrosine and serine/threonine kinase 140 223 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1080 Dod-Chr10 29493941 29497734 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1080 54 248 Receptor kinase-like Gene Family AT4G21410 42.029 1.14e-40 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g1080 PK_Tyr_Ser-Thr 6.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1080 - - ahf:112769704 296.975