Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1078 ATGAAAGGTTTTACCTTGCTTCTATTCCGCCTTCTTTTGCTGAATAATATGTCATTCTCTAATGCAATAGATACTATTGATACACTGCAATCTATCAGTGATGGTGAGACCTTAGTTTCAACTGATGAAACTTTTGCACTAGGATTCTTTAGTCCAGGAGCCTCCAAGAATCGTTATGTGGGAATTTGGTATAACAAACTCCTAAACAAAACAGTAGTATGGGTTGCCAACAGAGACACACCCCTCAATGACTCATCAGGGGTTTTGAAGATCAGTGACACCGGAATTATAGTCCTTCTAAACAATAATAACAGTGTCATTTGGTCCACCCCTAGCCCAACAAAAGCAACACAATCTCCAGTTGCAAAGCTTTTGAATTCTGGAAATTTCGTTGTGCAAGAGAAAAGCAATAGTGACCCGAAAGATTTCTTGTGGCAGAGTTTTGACTATCCATGTGACACTTTACTAGCTGGACAAAAGCTTGGAAGAAATCTAATCACAGGAAAGAATTGGCTCCTAACATCATGGAATAGCCCTGATGATCCATCTCTAGGTAGATATAGTTATCAAATTGATGTTGATGGATATCCACAATTAGTTATGAGAGATGGAACAGTCAAACGAATTCGTTCTGGATCATGGAATGGTAATCAATTTAGTGGGACGCCCCAGTTGAAACCAAATTCTATATTTAGATATCATTTTGTTTTCAATGAGGAAGAGGCATATTATACTTATGAGCTTGTCAACAGTTCAGTTCTTTATAGGGCTCAATTAACATCAAATGGATTTAGTGACCGTACTATCTGGAATGAAGGAAAAAAGGATTGGATCACCTGGTCACACATACCGATAGATGACTGTGATCAATATGCAATATGTGGAGCATATGCTAGTTGCAATGCAAACAACTTTGCATTTTGTACTTGCTTACATGGATTTGTGCATAATACAACAGATTCATCTAGTGATTGTGTTAGGAGAACTCCGCTGAGTTGCCATGGAGATGGATTTTTGAGGTTTCCCGGGCTGAAATTGCCTGACACAAAAGGATCATGGTTTAATAGAAGTATTAGCATTGAAGATTGTAGGATTTTGTGCCTGAATAATTGCTCTTGTACAGCTTATGCTGCTTTGAATGTTAGTAATGGGGAAAATGGGTGTTTACTATGGTTTGGCAATCTGATTGATATGAAAGACTTGACTCCATCTATTGAAGACATTTACATAAGGATGGCAGCGACAGAAGTTGAAGCTACTCAAGAAAAGAAATCACATAAATCCCGCATTCGGAAGCAAGAGAGGATCATCATAAGCTGTGTGCTGTCTTTAGGAGTTTTTATCATGTGCTTGGCCTTCATCATTTATAGATGGAAGATATGGCAGAAAGGAAAGATGAAAGGCGATCCAAAAAGAAAAGCAAGTGCAATGAATGACCACCATGAGGAAGATCTTGAACTACCCTTGTTTGATATGTCCACAATTACTTTTGCAACCAATAATTTTTCAATAAACAACATACTGGGGAAAGGTGGCTTTGGATTGGTTTATAAGGGTATCTTAGAAGATGGAAGAGAAATAGCTATCAAAAGGCTATCAAAGAATTCAAGCCAAGGACTCCAAGAATTTAAAAATGAAGTTATGCATGTTGTCAAACTCCAGCATAAGAATTTAGTGAAGCTACTAGGATGTTGCATTCAAGCAGAAGAAAGATTGTTGGTTTATGAATTTATGCCCAACAAAAGCTTAGACTTTTTCATATTTGATGAAAAGAAGGGTATGCTACTAGATTGGCCAAGGCGCTTGCACATCATCAATGGAGTTGCTCGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAAAATAGTTCATAGAGATCTAAAAGCTGCCAATATTTTGTTAGATGATAAAATGAGTCCAAAAATCTCAGACTTTGGCCTAGCTAGAAGCTTTGGTGAGAATCAATCTAAAGCAAACACACAACATGTGGCTGGAACGTATGGATATTTGTCACCAGAGTATATAATTGATGGAGATTACTCAACAAAATCTGATGTATTTAGCTTTGGTGTGTTGGTATTGGAGATAGTGAGTGGGAAGAGAAATAGAGGATTCTACCATCAAGATCATCACTTCAATCTTCTAGGGCATGTAAGTATGAACTTGAATTTTAATCACTTTTTATATGCTTCTGTAGGAAATAAAATAGATTGA 2217 0.3717 MKGFTLLLFRLLLLNNMSFSNAIDTIDTLQSISDGETLVSTDETFALGFFSPGASKNRYVGIWYNKLLNKTVVWVANRDTPLNDSSGVLKISDTGIIVLLNNNNSVIWSTPSPTKATQSPVAKLLNSGNFVVQEKSNSDPKDFLWQSFDYPCDTLLAGQKLGRNLITGKNWLLTSWNSPDDPSLGRYSYQIDVDGYPQLVMRDGTVKRIRSGSWNGNQFSGTPQLKPNSIFRYHFVFNEEEAYYTYELVNSSVLYRAQLTSNGFSDRTIWNEGKKDWITWSHIPIDDCDQYAICGAYASCNANNFAFCTCLHGFVHNTTDSSSDCVRRTPLSCHGDGFLRFPGLKLPDTKGSWFNRSISIEDCRILCLNNCSCTAYAALNVSNGENGCLLWFGNLIDMKDLTPSIEDIYIRMAATEVEATQEKKSHKSRIRKQERIIISCVLSLGVFIMCLAFIIYRWKIWQKGKMKGDPKRKASAMNDHHEEDLELPLFDMSTITFATNNFSINNILGKGGFGLVYKGILEDGREIAIKRLSKNSSQGLQEFKNEVMHVVKLQHKNLVKLLGCCIQAEERLLVYEFMPNKSLDFFIFDEKKGMLLDWPRRLHIINGVARGLLYLHQDSRHKIVHRDLKAANILLDDKMSPKISDFGLARSFGENQSKANTQHVAGTYGYLSPEYIIDGDYSTKSDVFSFGVLVLEIVSGKRNRGFYHQDHHFNLLGHVSMNLNFNHFLYASVGNKID* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1078 738 SMART serkin_6 502 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1078 738 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
Dod10g1078 738 ProSiteProfiles PAN/Apple domain profile. 333 414 IPR003609 -
Dod10g1078 738 CDD PAN_AP_plant 329 413 - -
Dod10g1078 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Dod10g1078 738 Pfam S-locus glycoprotein domain 210 316 IPR000858 GO:0048544
Dod10g1078 738 ProSiteProfiles Protein kinase domain profile. 502 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1078 738 PANTHER - 11 719 - -
Dod10g1078 738 Gene3D - 19 148 IPR036426 -
Dod10g1078 738 SMART ntp_6 333 412 IPR003609 -
Dod10g1078 738 PIRSF SRK 1 735 IPR024171 GO:0004674
Dod10g1078 738 Gene3D Hepatocyte Growth Factor 331 410 - -
Dod10g1078 738 Pfam Protein tyrosine and serine/threonine kinase 504 702 IPR001245 GO:0004672|GO:0006468
Dod10g1078 738 Gene3D Transferase(Phosphotransferase) domain 1 578 732 - -
Dod10g1078 738 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Dod10g1078 738 Pfam D-mannose binding lectin 71 176 IPR001480 -
Dod10g1078 738 SUPERFAMILY Protein kinase-like (PK-like) 481 718 IPR011009 -
Dod10g1078 738 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Dod10g1078 738 CDD B_lectin 30 151 IPR001480 -
Dod10g1078 738 Pfam PAN-like domain 333 398 IPR003609 -
Dod10g1078 738 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 11 719 - -
Dod10g1078 738 SMART blect_4 29 151 IPR001480 -
Dod10g1078 738 Gene3D Phosphorylase Kinase; domain 1 476 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1078 Dod-Chr10 29454098 29461824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1078 440 719 Receptor kinase-like Gene Family AT4G05200 55.634 1.14e-94 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g1078 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1078 - - adu:107462379 996.112