Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1073 ATGGAGGATCATGATGAGTTGTGTGCGCTGTGTGGGAAGAGGGCGAGGATGCTGTGTGAGTCGGACCAGGCTAAGCTATGCTGGGACTGCGACCGCAGTGTTCACGGTGCCAACTTCCTTGTTGCAAAACACGTGAGGGTGCTGCTGTGCCGCCTCTGCCACTCCCCAACTCCCTGGAAGGCTTCTGGCCCTTCACTCACCCCTACTTCCTCCATCTGCCACCTTTGTGCCCCCACCACTACACAGTCACCTAGTAATCATCATCATCGTCATCATGATGTTGTTCATGATGATGCTCATGGTGAATCTTATGATGATGATGATGAAGAAGAAGAAGAAGAATCTGATGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAGGGAGAGAACCAGGTTGTGCCTTGGTCTTCTTCGGAGGTTGTTGGTGGTGTGGGAAGTTCTACAAATAGTGAAGACAACGATGGAGATATGTCCAGCAACACTGCTTCTCGCGTTTTTACTTCACCCTTCAACTTGAAGCGTTTTCCCCATAACAACATCCACCATTCCGATGACGATGAAGATGATATAGGGTGTTCTTCATCGGAAGGTGTAGCCAATGATGAATCCAGCTCTATGAGCATGTTCAGGCCATTCAAGCAGCCTAGGCTTAGCCAGAGGGAGGCTGCACAATGGCACAATCAGAGATGGGGAAGAACACCAACTGAAGATTAA 714 0.4986 MEDHDELCALCGKRARMLCESDQAKLCWDCDRSVHGANFLVAKHVRVLLCRLCHSPTPWKASGPSLTPTSSICHLCAPTTTQSPSNHHHRHHDVVHDDAHGESYDDDDEEEEEESDEEEEEEEEEEEGENQVVPWSSSEVVGGVGSSTNSEDNDGDMSSNTASRVFTSPFNLKRFPHNNIHHSDDDEDDIGCSSSEGVANDESSSMSMFRPFKQPRLSQREAAQWHNQRWGRTPTED* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1073 237 MobiDBLite consensus disorder prediction 86 101 - -
Dod10g1073 237 MobiDBLite consensus disorder prediction 102 130 - -
Dod10g1073 237 ProSiteProfiles Zinc finger B-box type profile. 3 49 IPR000315 GO:0008270
Dod10g1073 237 Pfam B-box zinc finger 7 46 IPR000315 GO:0008270
Dod10g1073 237 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 220 - -
Dod10g1073 237 MobiDBLite consensus disorder prediction 80 237 - -
Dod10g1073 237 MobiDBLite consensus disorder prediction 131 174 - -
Dod10g1073 237 PANTHER OS08G0178800 PROTEIN 8 220 - -
Dod10g1073 237 Coils Coil 104 131 - -
Dod10g1073 237 MobiDBLite consensus disorder prediction 196 212 - -
Dod10g1073 237 CDD Bbox1_BBX-like 7 49 - -
Dod10g1073 237 SMART bboxneu5 3 49 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1073 Dod-Chr10 29045418 29046582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1073 8 94 C2C2-CO-like Transcription Factor Family AT5G54470 58.621 6.05e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1073 - - aip:107614151 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1073 10 29045418 29046582 Dod10g1073 10 29045418 29046582 ECH