Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1067 ATGACTAAGTCTTCTTCTAGTGAAAAGAATGGATTGAAGAAGGGTCCATGGACTCCAGAGGAAGATCAGAAGCTTATCGATTACATTCAGAATCATGGACATGGGAAGTGGCGAACTCTTCCCAAGAATGCAGGACTTAAAAGATGTGGAAAGAGTTGCCGGCTTCGGTGGGCTAACTACTTGAGGCCTGATATAAAGAGAGGAAGATTCTCATTCGAAGAAGAAGAAACCATCGTCCAGTTACACAGTGTTTTGGGAAACAAGTGGTCTACAATTGCAGCTAACTTGCCAGGAAGAACAGATAATGAGATCAAGAATTATTGGAACACCAGCATCAAGAAAAAGCTATTGAAGATGGGGATTGATCCGGTGACTCACACACCACGCCTTGATGTTCTTCAACTCTCTTCCATTCTAAGCTCATCTTTGTACAATTCAGCCCAACTTAACTACCCTGGTCTTTTGGGGATGGGAAGTGTGGCAGCAAATCCAAGCCAAGTGCTAAGTTTGCTCACAACTCTGCTATCATATCAAAGCAGGAACCCTGATGTTTTGAATCAAAATTTCCATCAAAACCAAATTGGTAGTGGCCCTTTATTGCAAAACCAATCCCAATGCTCTCAACCAGCAATGCAACTCAACTCTAGCCAAGCCTTCCAACCAAACCAACCTCCTCAAGTCTCAATTCAAGCACCCCAACAGCCTTGTGCTACATCTAATAATCCTCTGCATGTGGAACCGCAACACATGAAATCAAAATTAGACCATCAAATACCTCAAATTTCAACCCCTTTTAGCCACCAAAACAGTACACTACCAAATTTGTGGCACTATAATCAACAACATGCCGAATCATCATCAGCTACGCAGAATTTCCCTTCACCAAAGTTCAATTCCATTATCCTCAACAATCTCTTGGAAAATCAGATTTTGTGTAACAATGATGGGATGCCGAATTTCAATTTGAGCTCACTGTTGTCCTCAACACCTTCGTCTTCTAGCCCGAGTACTTTGAATTCGTCATCTTCCACGACATTTGTCAATGGAACCACTACCGAAGATGAAAGGGACACTTACGGCAGCAACATGTTGATGTATAGCATATCGAATGGCTTGAATAACTCTGGACTATTGTGA 1137 0.4213 MTKSSSSEKNGLKKGPWTPEEDQKLIDYIQNHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKRGRFSFEEEETIVQLHSVLGNKWSTIAANLPGRTDNEIKNYWNTSIKKKLLKMGIDPVTHTPRLDVLQLSSILSSSLYNSAQLNYPGLLGMGSVAANPSQVLSLLTTLLSYQSRNPDVLNQNFHQNQIGSGPLLQNQSQCSQPAMQLNSSQAFQPNQPPQVSIQAPQQPCATSNNPLHVEPQHMKSKLDHQIPQISTPFSHQNSTLPNLWHYNQQHAESSSATQNFPSPKFNSIILNNLLENQILCNNDGMPNFNLSSLLSSTPSSSSPSTLNSSSSTTFVNGTTTEDERDTYGSNMLMYSISNGLNNSGLL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1067 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Dod10g1067 378 Gene3D - 69 116 - -
Dod10g1067 378 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dod10g1067 378 SMART sant 66 114 IPR001005 -
Dod10g1067 378 SMART sant 13 63 IPR001005 -
Dod10g1067 378 CDD SANT 69 110 IPR001005 -
Dod10g1067 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 366 - -
Dod10g1067 378 MobiDBLite consensus disorder prediction 216 236 - -
Dod10g1067 378 CDD SANT 16 61 IPR001005 -
Dod10g1067 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Dod10g1067 378 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Dod10g1067 378 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 1 366 - -
Dod10g1067 378 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dod10g1067 378 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Dod10g1067 378 Gene3D - 11 67 - -
Dod10g1067 378 MobiDBLite consensus disorder prediction 326 358 - -
Dod10g1067 378 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1067 Dod-Chr10 28966260 28968228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1067 1 378 MYB Transcription Factor Family AT4G21440 46.134 1.80e-92 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod10g1067 Myb_DNA-binding 6.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1067 K09422 - gmx:100820398 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1067 10 28966260 28968228 Dod10g1067 10 28966260 28968228 ECH