Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1051 ATGGCCACCGCTCACACTCTCTCCGATCAACACCAGTACACTTCACGCGTTCCACGCATCAACTACTACACCTCCACCGACGACGAAGATGAACAAGACATAAACATTTCCGACGACGACAGCGACAACAACCACAAGCACGACAACATAAACGACAGCAGCGGCAGCGAAAAACGGCAGGACGCGAGGGTAGCCGCGGGCGGCGGCGGTTGGTGGTGGCCGGCTCGGCCGTCGCATAAGTGGTTGGAAGAGTGGAACCGGATGTTCCTGCTAGTTTCGGCGATGGGGCTGTTCGTGGACCCTCTGTTCATCTACGCGCTGTCGATAAGCGACACGTGCATGTGCCTGTTCGTGGACGGGTGGTTCGCCATCACCGTAACGGTGCTGCGATGCATGACCGACACGTTGCACATTTGGAACATGTGGTTGCAGCTCACCATCGCCAAACGCTCCTCGACCACCACCAATAGTACTACTAGCTCATCTCTTGCTCGTCGCTACATCAAGGACAAGTGGGGTTTCTTCTTTGATCTCTTTGTCATCCTTCCTCTACCCCAGATTGTGCTATGGGAGGCAATACCTTCTTTGTTGGAGAAAGGATCAATTACTTCGGTCATGACAGTGTTCTTAATTATGTTCCTCTTTCAATACCTTCCCAAAATTTATCACTCGGTGTGCCTCTTGCGTCGCATGCAAAACCTCACTGGCTACGTTTTTGGAACCGTTTGGTGGGGTATCGCCCTCAACATGATCGCATACTTTGTCGCGTCCCATGCAGCAGGAGCATGCTGGTACTTGCTGGGGATCCAAAGGGCAGCCAAGTGTCTAGAAGAGCAGTGTGGGAAATCATCAGCTGGTTGTGGAATGAGAACTCTATCTTGCAAACAACCAATATACTATGGAACCACTAGCATTGTGAGGGACAAAACAAGGTTGGCTTGGGCGGCAAACAGGGAAGCAAGGTCTACATGCCTAGACAGCTCCGACAACTATGACTATGGAGCTTATAAATGGACTGTTCAACTTGTAACAAATGATAATCGATTGGAAAAGATCCTTTTCCCAATCTTCTGGGGCCTAATGACTCTAAGCACCTTCGGGAACCTAGAGAGCACAACAGAATGGCTAGAAGTGGTTTTCAACATTATCGTGTTGACTAGTGGGCTTCTTCTAGTCACTATGTTGATTGGAAACATCAAGGTGTTTTTGCATGCTACAACATCAAAGAAGCAAGGGATGCAATTGAAGATGAGGAACATAGAATGGTGGATGAGCAAAAGGAGGTTGCCGCAAGGGTTCAGGCAGCGTGTACGCAACCATGAGAGGCAGCGCTGGGCTGCTATGCGTGGGGTTGACGAATGCCAGATGATCAAAAACCTCCCTGAGGGGCTCAGAAGGGACATCAAGTACCATCTCTGTTTGGACTTGGTGAGACAGGTGCCCCTTTTTCAGCATATGGATGATCTAGTCCTAGAGAACATTTGTGACCGTGTGAAGTCCCTAGTATTCACAAAGGGAGAAACAATCACCAGAGAGGGAGACCCGGTTCGAAGAATGCTATTTGTGGTAAGGGGTCATCTTCAGAGCAGCCAAGTCCTAAGAGATGGGGTGAAGAGTTGCTGCATGCTAGGCCCAGGGAACTTCAGTGGGGATGAGCTCCTTTCATGGTGTCTAAGGAGGCCCTTCATAGAGCGTCTTCCACCATCATCATTCACATTGGTCACACTTGAAACCACCGAGGCATTTGGGCTTGATGCCGAGGATGTGAAGTATGTGACACAACATTTTAGGTACACATTTGTGAAGGAAAAAGTGAAAAGAAGCGCTAGGTATTACTCGCCTGGGTGGAGGACTTGGGCTGCCGTGGCCATTCAGCTGGCTTGGAGGAGGTATAGACACCGCTTGACCTTGACATCATTGTCCTTTATAAGGCCTCGCAGGCCTCTATCAAGGTCCACTTCCATGGAAGAGGATAGGCTTCGGCTATATACTGCATTGTTAACCTCACCAAAGCCTAATCAGGATGATTTTGACTTTTGA 2040 0.4951 MATAHTLSDQHQYTSRVPRINYYTSTDDEDEQDINISDDDSDNNHKHDNINDSSGSEKRQDARVAAGGGGWWWPARPSHKWLEEWNRMFLLVSAMGLFVDPLFIYALSISDTCMCLFVDGWFAITVTVLRCMTDTLHIWNMWLQLTIAKRSSTTTNSTTSSSLARRYIKDKWGFFFDLFVILPLPQIVLWEAIPSLLEKGSITSVMTVFLIMFLFQYLPKIYHSVCLLRRMQNLTGYVFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLEEQCGKSSAGCGMRTLSCKQPIYYGTTSIVRDKTRLAWAANREARSTCLDSSDNYDYGAYKWTVQLVTNDNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLKMRNIEWWMSKRRLPQGFRQRVRNHERQRWAAMRGVDECQMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVRRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSFTLVTLETTEAFGLDAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRSTSMEEDRLRLYTALLTSPKPNQDDFDF* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1051 679 Pfam Cyclic nucleotide-binding domain 502 590 IPR000595 -
Dod10g1051 679 Pfam Ion transport protein 85 399 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod10g1051 679 ProSiteProfiles cAMP/cGMP binding motif profile. 482 592 IPR000595 -
Dod10g1051 679 CDD CAP_ED 482 588 IPR000595 -
Dod10g1051 679 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 18 676 - -
Dod10g1051 679 SMART cnmp_10 482 611 IPR000595 -
Dod10g1051 679 SUPERFAMILY Voltage-gated potassium channels 83 403 - -
Dod10g1051 679 MobiDBLite consensus disorder prediction 38 59 - -
Dod10g1051 679 SUPERFAMILY cAMP-binding domain-like 408 596 IPR018490 -
Dod10g1051 679 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 18 676 - -
Dod10g1051 679 MobiDBLite consensus disorder prediction 30 59 - -
Dod10g1051 679 Gene3D Jelly Rolls 480 598 IPR014710 -
Dod10g1051 679 Gene3D Helix hairpin bin 407 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1051 Dod-Chr10 28777335 28786222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1051 77 678 Ion Channels AT5G54250 78.793 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1051 K05391 - zju:107430493 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1051 10 28777335 28786222 Dod10g1051 10 28777335 28786222 ECH