Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1048 ATGATGTTATCAGCTTCTCCGAATTCTCTGGCGAGGAGCTCCCTGGAGGAGATGCTTGATTCGCTCCGGCGGAGGGATGAGGAGGAGAAGCCGAGGGACTTGCCGCCGGCATTGCCGGCACGGCCGACTTCCAGAGCACGGCTGCCATCGGCGCGGCGGTCGCTGCCTAACAGCTTCAAGGTCCATGGTGATGGTGTTAATGGACAATGTTTGAAGGATGTTGAGAGCAAGAGGAAGGAAAGGGGGGCTGGTGGTGGTGTTGTTGGTGTGGGACACAGGAGGAAACGTAGCTTTGGGAGCAAGAAGATGAAAGCTGATGTGGAATCACCTTACATTGTGAAATCAGAAGAGATCAACTTGAGTATTGAAGAACCATCATCATCATCACCACAACAAGGTCAGGTTTCAACATCTGGTGGTGATTCTGCTGTTGCTGCTTCTGCTGATGCTTCTGATGCTGCTGATGCTGCTTCTGTGGCCCCTCCTCCATCCGAGGAAGTGGGAGTTGAATTGGAGGATGATAACATTGGTTATTTCATTAAAAAGAAACTTTGTGTTTGGTGTAAGCAACAAAGAGGAAGGTGGGAACTAGGAAAGATACAGTCAACTTCAGGAGATGAAGCATCTGTTTCACTTTCAAATGGAGAAGTTATGAAAGTGCCCAGATTAGAGCTCCTCCCAGCTAATCCTGATATTTTAGAGGGTGTGGATGATCTTATACAGCTCAGTTACTTAAATGAGCCTTCAGTTCTTCACAATCTTCAGTTTAGATATTCACAAGATATGATTTATAGCAAAGCAGGACCAATTTTAATTGCACTCAACCCCTTCAAAGATGTCCAGATTTACGGAAAAGATTATGTCTCAGCTTATAGACAGAAATCTGTTGATAATCCTCATGTTTATGCCGTGGCAGATGCAGCTTATAATGAGATGTTAAGAGATGAAGTAAATCAATCCATTATCATAAGTGGCGAGAGTGGATCTGGGAAGACAGAGACAGCAAAAATTGCTATGCAGTACTTAGCTGATCTTGGTGGTGGCAGTTGTGGGATAGAAAATGATGTTCTTCAGACAAATTTTATACTAGAATCTTTCGGGAATGCAAAAACATCTAGGAATGGCAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAATGGGGAAAATTTGTGGGGCTAAAATTCAAACCTTCCTGTTAGAAAAGTCAAGAGTTGTTCAACTGGCCAGTGGCGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCACCTGAGCTTAAAGAGAGACTGAATCTTAGAGGGGCCATTGAATATAAATATCTTAATCAGAGTGACTGCATGACAATTGATGGTGTTGATGATGCTAAAAAGTTTCAAAGGCTGCTGAAAGCATTGGACATTGTTCGAATGTGCACAGAGGATCAAGAGCTGATCTTTAAGATGCTCACTGCAATATTATGGCTGGGAAATATATCATTCAGGGTTACTGACAATGATCATATTGAAGTGGTGGAAGATGAAGCTGTAACGACTGCTGCCTTGCTGATGGGTTGTAGTTCCCAGGAGTTAATGGTGGCTTTATCTACCCATAAAATCAAAGCTGGCAAGGATACTATTGCCAAAACGTTGACGTTGCGGCAGGCCATTGATACAAGAGATGCATTAGCAAAATTTATCTACGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTCAACAAGTCACTTGAAGTGGGTAAACGACGTACCGGGAGGTCCATTAGTATCCTTGATATTTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAGCAGTTTTGCATAAATTATGCCAATGAGAGGCTTCAGCAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGATGGTATTGATTGGACCAAAGTGGATTTTGAGGACAATCAAGAGTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGACTACTCTCTCTGTTGGATGAGGAATCAAATTTTCCCAGGGCCACTGATCTAACCCTCTCTACCAAACTTAAGCAGCACCTCGGCTCTAATCCTTGCTTCAAAGGGCAAAGTGGCAGGGCTTTCAGTGTTCATCACTATGCAGGGGAGGTTGTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATCCACTGCCTTCTGATTCCATTGAATTACTGTCATCATGTAGCTGTGAACTGCTGCAATCGTTCTCCATGATGCTTAACCTGTCTCAGAAGCAATCAAATTCCTTACACTTAGGTGCTATGGACTCTAAAAAGCAGACTGTTGGCACAAAGTTCAAGGGCCAATTGTTTAAGTTGATGCATCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGTATAAAGCCAAATGCTAAGCAAATTCCTGGCGTATATGATGAAGACCTTATCCTAGAACAGCTCAAGTGTTGTGGAGTTTTGGAAGTTGTTAGGATTTCAAGGGCTGGATATCCTACTCGTATGACTCATCAAGAGTTTGCCAGAAGACATGGGTTACTCCTGTCTGAGGCCAATGCATCTCAGGATCCATTGAGCATCTCAGTTGCTGTTTTGCAACAATTTAATATCCCACCTGAAATGTACCAAGTTGGCTACACCAAATTGTATTTCCGGTCAGGGCAGATTGGTGCACTAGAGGATAGGAGAAAACAGATTTTGTGGGGAATACTTGGCGTTCAAAGAAGTTTTCGTGGTCATCAAGCTCGCACTTATTATCGTGAACTTAAGAATGGAGCGACAACTTTACAATCATTTGTTCGAGGAGAAGATGCAAGAAGGAAATATGGTGTTATGATGAAGTCCTTTGTAACAATTTCTTCTGAAAAAGCCAAGGAGATCCAGGCAGTCATGACAATACAATCTGTAATTCGTGGGTGGCTGGTTCAAAAGCATGCTAGTGACATTAATAAGTTTAACAAATGTCCAGAAAATGCAAGAACAAGAAGACAGTCACATTCGAAGATGCCAGAAATAAAGCTGGATGTGTCCAAAGAGCGGGCTCCGAGCCTGCCCTCAGCTTTAGCAGAACTCCAAAGGCGGGTTGTCAAGGCTGAAGCAACCCTAGAGCAAAAAGAAGAGGAAAATGCTGAATTGAGGGAACAACTAAAACAGTTCGAGAGAAGGTGGATTGAATATGAGACCAAGATGAAATCAATGGAGGAGATGTGGCAAAAACAGATGGCATCGTTGCAAACGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCCTCTGAGATTGCGTCTAGTCAACAAGTAAGACATGATGGTGTGTCATCTTTTGGCTATGAGTCTGAAGATGCTACTTCCATGGGATCTCGAACACCTCGAACGCCTGGCGTGAGCACGCCGTTGAAGTATTCTAGTAGTCTTTCTGAGCTCGGAGTAGGAAGAGAAGCTAATGGTACTATAAGTACAGTCAACTGTTTGGCGAAGGAATTTGAGCAGCAGAGGCAGACCTTTGACAACGACGCCAAAGCTCTGGCCGAGGTTAGAACAGGTCAATCCGGCTGCATGAATTCCGTCGAAGAACTTCGGAGGCTTAAACATAGGTTTGAGGCGTGGAAGAAAGAATACAAGGTTAGATTAAGGGAGACAAAAGCAAGAATTCAGAAATTTGGGCATTCAGATGTGGAAAAAGGCCGGCGAAAATGGTGGGGGAAATTAAGTTCAAAAGCACAATAG 3738 0.4331 MMLSASPNSLARSSLEEMLDSLRRRDEEEKPRDLPPALPARPTSRARLPSARRSLPNSFKVHGDGVNGQCLKDVESKRKERGAGGGVVGVGHRRKRSFGSKKMKADVESPYIVKSEEINLSIEEPSSSSPQQGQVSTSGGDSAVAASADASDAADAASVAPPPSEEVGVELEDDNIGYFIKKKLCVWCKQQRGRWELGKIQSTSGDEASVSLSNGEVMKVPRLELLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYSQDMIYSKAGPILIALNPFKDVQIYGKDYVSAYRQKSVDNPHVYAVADAAYNEMLRDEVNQSIIISGESGSGKTETAKIAMQYLADLGGGSCGIENDVLQTNFILESFGNAKTSRNGNSSRFGKLIEIHFSTMGKICGAKIQTFLLEKSRVVQLASGERSYHIFYQLCAGSSPELKERLNLRGAIEYKYLNQSDCMTIDGVDDAKKFQRLLKALDIVRMCTEDQELIFKMLTAILWLGNISFRVTDNDHIEVVEDEAVTTAALLMGCSSQELMVALSTHKIKAGKDTIAKTLTLRQAIDTRDALAKFIYASLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVDFEDNQECLDLFEKKPLGLLSLLDEESNFPRATDLTLSTKLKQHLGSNPCFKGQSGRAFSVHHYAGEVVYDTNGFLEKNRDPLPSDSIELLSSCSCELLQSFSMMLNLSQKQSNSLHLGAMDSKKQTVGTKFKGQLFKLMHQLESTTPHFIRCIKPNAKQIPGVYDEDLILEQLKCCGVLEVVRISRAGYPTRMTHQEFARRHGLLLSEANASQDPLSISVAVLQQFNIPPEMYQVGYTKLYFRSGQIGALEDRRKQILWGILGVQRSFRGHQARTYYRELKNGATTLQSFVRGEDARRKYGVMMKSFVTISSEKAKEIQAVMTIQSVIRGWLVQKHASDINKFNKCPENARTRRQSHSKMPEIKLDVSKERAPSLPSALAELQRRVVKAEATLEQKEEENAELREQLKQFERRWIEYETKMKSMEEMWQKQMASLQTSLAAARKSLASEIASSQQVRHDGVSSFGYESEDATSMGSRTPRTPGVSTPLKYSSSLSELGVGREANGTISTVNCLAKEFEQQRQTFDNDAKALAEVRTGQSGCMNSVEELRRLKHRFEAWKKEYKVRLRETKARIQKFGHSDVEKGRRKWWGKLSSKAQ* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1048 1245 MobiDBLite consensus disorder prediction 121 167 - -
Dod10g1048 1245 PANTHER MYOSIN 35 1243 - -
Dod10g1048 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 956 IPR027417 -
Dod10g1048 1245 MobiDBLite consensus disorder prediction 1 102 - -
Dod10g1048 1245 Gene3D - 909 955 - -
Dod10g1048 1245 Pfam Myosin head (motor domain) 236 891 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g1048 1245 ProSiteProfiles IQ motif profile. 908 934 IPR000048 GO:0005515
Dod10g1048 1245 MobiDBLite consensus disorder prediction 1113 1137 - -
Dod10g1048 1245 CDD MYSc_Myo8 248 891 IPR036022 -
Dod10g1048 1245 ProSiteProfiles IQ motif profile. 928 957 IPR000048 GO:0005515
Dod10g1048 1245 Gene3D Myosin VI head, motor domain, U50 subdomain 474 581 - -
Dod10g1048 1245 SMART MYSc_2a 228 904 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g1048 1245 Pfam IQ calmodulin-binding motif 967 984 IPR000048 GO:0005515
Dod10g1048 1245 Pfam IQ calmodulin-binding motif 931 948 IPR000048 GO:0005515
Dod10g1048 1245 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 181 230 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod10g1048 1245 MobiDBLite consensus disorder prediction 1 15 - -
Dod10g1048 1245 ProSiteProfiles IQ motif profile. 965 993 IPR000048 GO:0005515
Dod10g1048 1245 Coils Coil 1027 1075 - -
Dod10g1048 1245 ProSiteProfiles Myosin motor domain profile. 234 903 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g1048 1245 MobiDBLite consensus disorder prediction 17 35 - -
Dod10g1048 1245 Gene3D - 417 473 - -
Dod10g1048 1245 PANTHER MYOSIN-2 ISOFORM X1 35 1243 - -
Dod10g1048 1245 MobiDBLite consensus disorder prediction 121 144 - -
Dod10g1048 1245 PRINTS Myosin heavy chain signature 645 673 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g1048 1245 PRINTS Myosin heavy chain signature 264 283 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g1048 1245 PRINTS Myosin heavy chain signature 592 620 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g1048 1245 PRINTS Myosin heavy chain signature 361 388 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g1048 1245 PRINTS Myosin heavy chain signature 318 343 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g1048 1245 SMART iq_5 927 949 IPR000048 GO:0005515
Dod10g1048 1245 SMART iq_5 904 926 IPR000048 GO:0005515
Dod10g1048 1245 SMART iq_5 964 986 IPR000048 GO:0005515
Dod10g1048 1245 Gene3D - 604 793 - -
Dod10g1048 1245 Gene3D Kinesin motor domain 233 836 IPR036961 -
Dod10g1048 1245 Gene3D - 837 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1048 Dod-Chr10 28717948 28728821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1048 1 1239 Myosins gene family AT5G54280 61.599 0.0 1550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1048 K10357 - gmx:100801876 1824.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1048 10 28717948 28728821 Dod10g1048 10 28717948 28728821 ECH