Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1045 ATGAACGAGAAGGCCAACGTTACCAAGGAACTCAACGCCAAGCACAAGAAGATACTGGAAGGGCTTCTTAAATTACCAGAGAATAGGGAATGTGCTGACTGTAAAGCTAAGGGTCCAAGATGGGCTAGTGTAAATCTTGGCATCTTTATATGCATGCAATGTTCTGGAATACATCGAAGTTTGGGGGTACATATATCAAAGGTTCGTTCTGCAACTCTGGACACTTGGCTTCCAGAGCAAGTTGCATTTATTCAATCCATGGGAAATGAGAAAGCAAATAGTTACTGGGAAGCAGAATTACCTCCAAACTATGATCGAGTTGGAATTGAGAATTTCATTCGTGCAAAGTATGAAGAGAAAAGATGGGTTCCAAGGGATGGGAAACCAAAATCACCTTCTAGACTGCAGGAAGAGAAAACTTCTTCACACTGGCAGAGGGCTGGGGAAAGAAGTGGGCATGGTTATGCTGCTACTTCTCAGAATACCTTCGAGGAAAGGAAGAAAATCCAAACATCAAATGCAATTCCTGCTACAAGAATTAATGTTCCTACTCCTCCCAAAGGACCTGAGCATGTGTCTCCTGTTCCCAAACCTCAGCACATCGAGACAGTGGAACCAGTAGCACCACAACCACAAGTTGAAACTTCAAAGCAGGTTACAGACACAGCTAAAAATACCCCTCCAAAAGTTGACTATGCTACAGATCTTTTCAACATGTTATCCATGGATGGCCCTAGTGAAAATGGCTCAGAGGCTACTGATGCAACCACTGATGATAATAACTGGGCAGGTTTCCAGTCTGCTTCTGAGGCATCAACATCTGAGAAGACTCCTCCAAAATCAGTTGAGAGTACTCCCCAGTCTGCATCTGGAATTGAGGATCTATTTAAAGATTCACCTTCAGTGACACCAAGCTTAGCTGCAGATAAACCGCAGAAGGATGTAAAAAATGATATCATGAGCCTCTTTGAGAAGAGCAATATGGTGTCTCCTTTTTCTTTGCATCAACAGCAACTTGCCATGCTAGCACAGCAACAGTCTCTTCTAATGGCTGCTGCAGCTAAATCTACTTCTGGGGATCCCAGATACCCTGCTAGTGTACAACCACCTAGGCCCAATATTCCTGTCCAGAGTTGGCCAGCTGCTGCCTACCCGATGTCTGGAGTAATGCCCATGGGTGGTCAGGGAGAGCTGCAGAAACTTATGCAGACTAGGAACGTAACTCCAGCACACCCAGCAGGGAGCTCTGTTCCGTATCCACCATCAGGTTTCTATGGTGTGGGGCAAGTTGCTCCAGTCAATGGAATGATGACAATGGGAGTGAGTAAAGCTCAACCAGCAGCTCCAGTGTCATCAACCACTTCACAATCTGCCAAGGATTATGATTTTTCCTCCTTAACACAAGGGATGTTTGCAAAACCCTGA 1425 0.4505 MNEKANVTKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVPRDGKPKSPSRLQEEKTSSHWQRAGERSGHGYAATSQNTFEERKKIQTSNAIPATRINVPTPPKGPEHVSPVPKPQHIETVEPVAPQPQVETSKQVTDTAKNTPPKVDYATDLFNMLSMDGPSENGSEATDATTDDNNWAGFQSASEASTSEKTPPKSVESTPQSASGIEDLFKDSPSVTPSLAADKPQKDVKNDIMSLFEKSNMVSPFSLHQQQLAMLAQQQSLLMAAAAKSTSGDPRYPASVQPPRPNIPVQSWPAAAYPMSGVMPMGGQGELQKLMQTRNVTPAHPAGSSVPYPPSGFYGVGQVAPVNGMMTMGVSKAQPAAPVSSTTSQSAKDYDFSSLTQGMFAKP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1045 474 MobiDBLite consensus disorder prediction 241 294 - -
Dod10g1045 474 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Dod10g1045 474 CDD ArfGap 19 117 - -
Dod10g1045 474 MobiDBLite consensus disorder prediction 123 146 - -
Dod10g1045 474 MobiDBLite consensus disorder prediction 209 227 - -
Dod10g1045 474 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Dod10g1045 474 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Dod10g1045 474 PANTHER ARF GTPASE ACTIVATOR 1 473 - -
Dod10g1045 474 MobiDBLite consensus disorder prediction 207 312 - -
Dod10g1045 474 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Dod10g1045 474 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Dod10g1045 474 MobiDBLite consensus disorder prediction 123 159 - -
Dod10g1045 474 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 473 IPR044520 GO:0005096
Dod10g1045 474 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Dod10g1045 474 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Dod10g1045 474 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1045 Dod-Chr10 28690307 28696659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1045 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 4.47e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1045 K12486 - gmx:100789910 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1045 10 28690307 28696659 Dod10g1045 10 28690307 28696659 ECH