Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1032 ATGGAGAGCACCGACTCATCCACCGGCTCACAACAACCGAACCTTCCACCTGGGTTCAGGTTCCACCCCACGGACGAGGAGCTCGTAGTTCACTACCTCAAGAAGAAAGCCGAATCAGCTCCTATCCCTGTTGCCATCATCGCCGAGGTTGATCTCTACAAGTTTGATCCATGGGAGCTACCAGCTAAGGCAACGTTTGGGGAGCAAGAGTGGTACTTCTTTAGCCCGAGGGACAGGAAGTATCCAAACGGGGCGAGGCCAAACAGGGCCGCGACTTCCGGGTATTGGAAGGCAACTGGGACTGATAAGCCTGTGTTGACCTCTGGTGGGACTCAGAAGGTTGGTGTGAAGAAAGCTTTGGTCTTCTATGGAGGGAAGCCACCAAGAGGTATCAAGACCAATTGGATCATGCATGAGTATAGGCTTGTTGACAACAAGCCTAACAATAGGCCTCCCGGGTGTGACTTGGGCAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGCTGTGCCGAATCTACAAGAAGAACAACACACATAGGTCCCCTACGGAACATGACAGGGAAGATTCAATGGATGACATGATTGGAGGGATCCCTCCTTCCATCAACGTGGGCCAGATGAATGCTAGATTTCACCACCTTTCCAAGATGTCCACAACCACAAGCTACAGCACTGCATTGTTCGAAAATGACCATCATCACCAGAACACCCTATTGGAAGGGATGATGATAGGAAACAGTTGTGGTGGTGGGATCACCACAAGTGCTCCTGCCAATAACATGTCATCTCATCATCACTTGGGAGCCTCAAACTCCAAGGCAGAGCTCCCTTTTGTCTCATCCATGACTGCATCTTCCAACAACAATTCTGCCTCTAAGAGAACACTCTCATCACTGTTCAATTTGGAAATTGGGGATCATGGAAGTGTTGTGAGGACAGAAGAGAATGGCACTGCTAGCTCTATTGCCACTCTGCTGAATCAGCTCCCTCAAACACCTTCATTGCACCAACAGACCATGATGGGATCAATAGGTGATGGTCTAATTCGGACAACATACCAAATACCAGGGATGAATTGGTATGTTGGAAGAAAGTTAGAGTCTGATCAATTAGATGGCCTCAAAAAGAATTTCTTCAACTCTTGGATGCAGCTGCTGGCAATGACAAACATATGGAACTATTCGGATTTTTAA 1197 0.4787 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAESAPIPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLVDNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPTEHDREDSMDDMIGGIPPSINVGQMNARFHHLSKMSTTTSYSTALFENDHHHQNTLLEGMMIGNSCGGGITTSAPANNMSSHHHLGASNSKAELPFVSSMTASSNNNSASKRTLSSLFNLEIGDHGSVVRTEENGTASSIATLLNQLPQTPSLHQQTMMGSIGDGLIRTTYQIPGMNWYVGRKLESDQLDGLKKNFFNSWMQLLAMTNIWNYSDF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1032 398 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Dod10g1032 398 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Dod10g1032 398 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Dod10g1032 398 MobiDBLite consensus disorder prediction 1 20 - -
Dod10g1032 398 PANTHER NAC TRANSCRIPTION FACTOR 56 1 339 - -
Dod10g1032 398 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Dod10g1032 398 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 339 - -
Dod10g1032 398 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1032 Dod-Chr10 28431098 28433829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1032 1 362 NAC Transcription Factor Family AT3G15510 53.704 1.38e-123 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g1032 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1032 - - gmx:100170710 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1032 10 28431098 28433829 Dod10g1032 10 28431098 28433829 ECH