Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1031 ATGGGAGTTCCTGAGAAAGACCTTCTTTCTCAATTGAGTTTGCCACCAGGTTTCCGATTTTACCCCACGGACGAGGAGCTCCTCGTTCAGTATCTATGCCGCAAGGTTGCTGGCCACCATTTCTCTCTTCAAATCATTGCCGAAATCGACTTGTACAAGTTCGACCCCTGGGTCCTTCCAAGCAAGGCGATTTTCGGTGAGAAAGAGTGGTACTTCTTTAGCCCGAGAGACAGGAAGTACCCGAATGGTTCACGACCCAACAGGGTAGCCGGGTCCGGGTACTGGAAAGCCACGGGAACCGATAAGATCATCACCACTGAAGGCAGAAAAGTTGGCATCAAGAAAGCCCTCGTTTTCTACATTGGCAAAGCCCCAAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGCCTCCTAGACTCCTCCCGCAAAAATGGCAGCACCAAGCTTGACGACTGGGTTCTGTGTCGGATATACAAGAAGAACTCGAGCGCGCAGCAGAAGAGCATGGTTCCAACAAACGGCGTCGTTTCGTGCAACGAGTACACACAATTCAGCAGCGGCTCCTCCCCATCCTCCTCCTCTCACCTCGACGACGTCCTCGACTCCCTACCAGAGATCGGCGGCCACACCTTCGCCCTGCCACGTGTCAACTCCTTGAGGGCCCTGCTCCACCACGACGACAACAAGTTGGGCCTCCAACAGCAGCAGCAGCAGCAGGGCCACGTCGGCGCCGGGAGCTTCATGGACTGGGCCGGCCCGGGGTTTCTCAACTCCGTCGCGGCAGAATTGGGCCAGGCCCAACAAGGGATGGTGAACTTCGGTAATGACCTTTTTGTCCCTTCGATGGAGGAGGAGGTACAGAGTGGAGTGAAGGCCCAGCGGGGCGAGAATTCCGGGTTCTATCAACAGGGTCCGAATCAGAATGATTTCACCCAAGGATTCTCGAGCCAAGCTGACCCGTATGGGTTTAGGTACCCGGCTCAATCGACCGGGTTTGGGTTCAGGCAATGA 1017 0.5477 MGVPEKDLLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKNGSTKLDDWVLCRIYKKNSSAQQKSMVPTNGVVSCNEYTQFSSGSSPSSSSHLDDVLDSLPEIGGHTFALPRVNSLRALLHHDDNKLGLQQQQQQQGHVGAGSFMDWAGPGFLNSVAAELGQAQQGMVNFGNDLFVPSMEEEVQSGVKAQRGENSGFYQQGPNQNDFTQGFSSQADPYGFRYPAQSTGFGFRQ* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1031 338 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Dod10g1031 338 PANTHER NAC TRANSCRIPTION FACTOR 56 1 307 - -
Dod10g1031 338 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Dod10g1031 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 307 - -
Dod10g1031 338 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Dod10g1031 338 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Dod10g1031 338 MobiDBLite consensus disorder prediction 298 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1031 Dod-Chr10 28397902 28400284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1031 1 304 NAC Transcription Factor Family AT4G27410 60.125 1.69e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g1031 NAM 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1031 - - gmx:100170718 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1031 10 28397902 28400284 Dod10g1031 10 28397902 28400284 ECH