Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1030 ATGGATCGCGAGATGGTAGACATTGAATCTCAAGCTACCAACCGAGTGCATGAGGAAGTGCCTGATGTCTTCCAAAAGAGGAAAACTCCTGTAACTCTCAAGTTTGATGATGTTGTCTACAAAATCAAGTGCGAAAAGGGTGGACTACTTGATAAGAACACAAAGGCAGATGAGAAAGTGATCCTGAAAGGGATAACAGGAATTGTTCAACCAGGTGAGATGCTAGCCATGCTAGGTCCCTCAGGGAGTGGCAAAACAACTCTGCTAACAGCCTTAGGAGGCAGGCTTGGGGGTAGGCTCTATGGTAAAATAACCTACAATGGAGAACCCTTCTCAAATTCAATGAAGAGGAACACTGGTTTTGTCACACAAGATGATGTTCTGTACCCTCACTTGACTGTGGCTGAAACCCTAGTGTTCACTGCCCTCCTCAGGTTGCCCAACACTATCCCCAAAGAAGACAAAATTGCACATGCAAAAGCTGTGATGGAACAACTTGGCTTGACAAGGTGCAAGGATGGCATCATTGGAGGGCCTGATCTGAGAGGGATTTCTGGGGGAGAGAGGAAAAGGGTTAGTGTTGGCCAAGAATTGCTCATTAACCCAAGGTTGTTGTTCCTTGATGAGCCTACCTCAGGCTTGGACTCAACCACGGCACAGAGAATTGTGTCTGCTTTGTGGGAGCTAGCAAGGGGAGGGAGGACTATTGTGATGACAATACACCAACCTTCTAGCAGGCTATACTACATGTTCCATAAGGTGTTACTCCTTTCTGAAGGGAACACTTTGTACTTTGGAAAGGGGTCTGAGGCCATGGATTATTTCTCTAGTATTGGATATGCCCCAGCATTAGCCATGAACCCTTCAGATTTCCTTTTGGATCTTGCAAACGGCATCTACACGAATGAATTGAATGAGGACTGTGTCATAGATAAACAACAATTGGTTAACGCATACAAGAGTCACTTTGATTCCCAATTGAGGCCGATGCTTCAAGAAATCAATGGCTCTGGTGAAGTCAACGGTAGAGTTGAAGGCACAGGCTATGGAAAATGGCCTACCAGTTGGTGGGAGCAATTCTATGTGCTATTAAGAAGAGACATTAAAGAGAGAAAGCACGAAGCGTTCTCTTTCTTCCATATGTGTCAGGTCCTCTTGGTTGCTATCATTTCAGGACTATTGTGGTATAAGTCTGATACCTCACACTTGCAGGATCAGGTTGGGCTTCTGTTCTTCATATCATCCTTCTGGGGCTTCTTACCTCTCTACAGAGCAATTTTTGTCTTTCCTCAAGAGCGAGTGATGCTGGAGAAAGAAAGATCCTCAGGAATGTATAGGCTCTCCTCATACTACATCTCAAGGATGGTAGCTGATCTTCCACTGGAGCTCATCCTCCCAACAATATTCATGATCATAACATATTGGATGGCAGGGCTCAAAACCAGTGTGGCCAATTTCCTATTCACAGTGCTAAGTGTCTTGCTCCTTGTGTTGGTCTCACAAGGACTAGGCCTTGCACTTGGTGCTGTTGTTCAGGAACAAAAATCAGCAACAACACTTGCCTCAGTGCTTGGACTAACCTTCATGTTGGCCAGTGGATTCTATGTTCAGCATGTGCCAAACTTCATAGGGTGGGTGAAGTATGTGTCCATACTCTACTACACAAACCAGCTCTTTATTCTATCACAGTTTCATGCTGGTGAGACATACCCTTGTCCTAGTGGCCATTGCCTAGTTGAAGAGTTTCCTGCCATAAAGGAAATGGGGTTCAATTTGCACGGGCATTTGAAGGCTTCACTGGCTCTTTTGGCAATGCTAATTGGTTACAGGCTTATAGCTTATCTTGCTCTTATGAGGATTGGGGTGACAAAGAAATTGGCCTAG 1884 0.4501 MDREMVDIESQATNRVHEEVPDVFQKRKTPVTLKFDDVVYKIKCEKGGLLDKNTKADEKVILKGITGIVQPGEMLAMLGPSGSGKTTLLTALGGRLGGRLYGKITYNGEPFSNSMKRNTGFVTQDDVLYPHLTVAETLVFTALLRLPNTIPKEDKIAHAKAVMEQLGLTRCKDGIIGGPDLRGISGGERKRVSVGQELLINPRLLFLDEPTSGLDSTTAQRIVSALWELARGGRTIVMTIHQPSSRLYYMFHKVLLLSEGNTLYFGKGSEAMDYFSSIGYAPALAMNPSDFLLDLANGIYTNELNEDCVIDKQQLVNAYKSHFDSQLRPMLQEINGSGEVNGRVEGTGYGKWPTSWWEQFYVLLRRDIKERKHEAFSFFHMCQVLLVAIISGLLWYKSDTSHLQDQVGLLFFISSFWGFLPLYRAIFVFPQERVMLEKERSSGMYRLSSYYISRMVADLPLELILPTIFMIITYWMAGLKTSVANFLFTVLSVLLLVLVSQGLGLALGAVVQEQKSATTLASVLGLTFMLASGFYVQHVPNFIGWVKYVSILYYTNQLFILSQFHAGETYPCPSGHCLVEEFPAIKEMGFNLHGHLKASLALLAMLIGYRLIAYLALMRIGVTKKLA* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1030 627 Pfam ABC transporter 62 212 IPR003439 GO:0005524
Dod10g1030 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 621 - -
Dod10g1030 627 Pfam ABC-2 type transporter 241 321 IPR043926 GO:0140359
Dod10g1030 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 6 621 - -
Dod10g1030 627 Pfam ABC-2 type transporter 358 563 IPR013525 GO:0016020|GO:0140359
Dod10g1030 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 284 IPR003439 GO:0005524
Dod10g1030 627 CDD ABCG_EPDR 30 266 - -
Dod10g1030 627 Gene3D - 50 278 IPR027417 -
Dod10g1030 627 SMART AAA_5 71 261 IPR003593 -
Dod10g1030 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 277 IPR027417 -
Dod10g1030 627 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1030 Dod-Chr10 28383707 28387783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1030 61 245 Calmodulin-binding Proteins AT2G36910 28.205 6.65e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1030 K05681 - gmx:100816135 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1030 10 28383707 28387783 Dod10g1030 10 28383707 28387783 ECH