Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1001 ATGAAGGTTCATCAGTTCACACGTGGAATATGGGAGCATGAACCCTCTCTCACACTTGGGTGCAAGCGCTTACGCCCCCTTGCTCCCAAGCTTTCCAGCACCACTGACACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCTTGCACCCTTCGATCTCAAGAGCTTCATCAAACCTGAAAGTGGCTCCAGAAAACTTGGATCATCCTCTAGCGATGATGATAATAATAATAATAATAGGAGAGATCCTCCATCACCACGAGGCCAGGTGGAAGCGCATCTAGGAGGGACAAGGTGGAATCCAACGCAAGAACAGATAGGGATATTGGAGATGCTGTACAAAGGGGGGATGCGAACCCCAAATGCTCAGCAGATAGAGCATATCACAGCACAGCTTGGGAAATACGGCAAGATCGAAGGGAAGAATGTGTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGGCAAAAGCAGAAGCGCAGTAGCCTTGGCCTTGCTCATAGCCCTCGAACTCCCACCACTACAATAGTAGTGTCACCCACCTTTACTAATAGTGTACATTTTGAGACAACAAGGGTATGTTACAGACTCCAAACACAATATATATTCTAA 618 0.4806 MKVHQFTRGIWEHEPSLTLGCKRLRPLAPKLSSTTDTPPPPPPPPPPPSLAPFDLKSFIKPESGSRKLGSSSSDDDNNNNNRRDPPSPRGQVEAHLGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRSSLGLAHSPRTPTTTIVVSPTFTNSVHFETTRVCYRLQTQYIF* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1001 205 Gene3D - 99 164 - -
Dod10g1001 205 SMART HOX_1 96 163 IPR001356 GO:0003677
Dod10g1001 205 MobiDBLite consensus disorder prediction 33 52 - -
Dod10g1001 205 SUPERFAMILY Homeodomain-like 97 164 IPR009057 -
Dod10g1001 205 Pfam Homeodomain 99 158 IPR001356 GO:0003677
Dod10g1001 205 ProSiteProfiles 'Homeobox' domain profile. 104 159 IPR001356 GO:0003677
Dod10g1001 205 CDD homeodomain 99 160 IPR001356 GO:0003677
Dod10g1001 205 SUPERFAMILY Formin homology 2 domain (FH2 domain) 38 48 - -
Dod10g1001 205 MobiDBLite consensus disorder prediction 26 103 - -
Dod10g1001 205 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 189 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1001 Dod-Chr10 28067435 28069163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1001 1 185 Wox Gene Family AT1G46480 58.854 6.97e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod10g1001 Homeodomain 6.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1001 - - aprc:113848075 282.337