Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod10g0998 | ATGGCTGAGTTCACAGAATTGCTCCCCTTAGGGGAACAAATTGATGTCTTGGTGCATATGTATCAGCATATAATCACTTTTGATATTGAAACTTCTGTCATTTCTTGTGTCATAATCACATTGTTCTTCTTCATCTTCTATCAAATCTTGAACGGTTTGTTCTTTTGGTTCTTGAAAGTTAGGCCAGATGATGAATTACATGATCTTGAAGAAGGGACTTCCCTAGCTTATGGTGCATATGGATATGGGGTATCATCATCTCACCATGTTACCATCCTTCAAGATCTTACCCATGCAAATAATATGGAGGAGGCTAATCGGGCAATGGGGGCTACACTTGAAGAAGAAGAAGAAGAAGAAGATTTTGATGAGAAAAGAGGCCAAAAGCTTAGAGCTTCAAATAAATTACCTCCATTGGTAAACTATGGAATGCATAAACTGAAAAGGGCCTGTGGTGATTGTGCCATTTGCTTGGAGAATTTCGAAGCTGGCCAATTTTGTCAAGTATTTCCTGTGTGCAAGCACATTTTTCATTCAGATTGTATAGATAACTGGTTGCAGAGGAAATCAACCTGCCCAATATGTCGTAGTAGCATCATGTAG | 603 | 0.3897 | MAEFTELLPLGEQIDVLVHMYQHIITFDIETSVISCVIITLFFFIFYQILNGLFFWFLKVRPDDELHDLEEGTSLAYGAYGYGVSSSHHVTILQDLTHANNMEEANRAMGATLEEEEEEEDFDEKRGQKLRASNKLPPLVNYGMHKLKRACGDCAICLENFEAGQFCQVFPVCKHIFHSDCIDNWLQRKSTCPICRSSIM* | 201 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod10g0998 | 200 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 22 | 200 | - | - | |
Dod10g0998 | 200 | PANTHER | - | 22 | 200 | - | - | |
Dod10g0998 | 200 | SUPERFAMILY | RING/U-box | 153 | 199 | - | - | |
Dod10g0998 | 200 | ProSiteProfiles | Zinc finger RING-type profile. | 154 | 196 | IPR001841 | - | |
Dod10g0998 | 200 | SMART | ring_2 | 154 | 195 | IPR001841 | - | |
Dod10g0998 | 200 | CDD | RING-H2_PA-TM-RING | 153 | 196 | - | - | |
Dod10g0998 | 200 | Pfam | Ring finger domain | 153 | 196 | IPR001841 | - | |
Dod10g0998 | 200 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 98 | 200 | IPR013083 | - | |
Dod10g0998 | 200 | Coils | Coil | 99 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod10g0998 | Dod-Chr10 | 28032209 | 28032811 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod10g0998 | 127 | 199 | C3H Transcription Factor Family | AT2G18670 | 39.726 | 3.15e-15 | 68.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod10g0998 | - | - | gmx:102660073 | 236.498 |