Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod10g0997 | ATGAGTTCGGTTTCTCAAACCTTTGCACCACAAGCATCCTCAGACCCTTCTCTCACATTTTCAAATTTTATTGCCCATGCCGCCAATGTGATTTTAATCTTGTTATTATCTCTTTTTATGGCCACCATACTTTCAACAATAGTTGTTCTCCTTCTATTAAAGTTTTGTGAATACATATCTGATGCTCTTCTTGAAACACTTGATGATGATATTGAAGATGGAAGAGTAAGGACATTGGTGGTTAGATCTTCCTTGACATACCAAGGTGCTTTGAACCAGATAAGCGGTAGTAGGGAAAGGCTACAAACATTTCTACAAGCTTATGAGATGAGATCATTTCACAAACGACGGCACTCACAAAAACTTTTGCCGCCCCATGTTATTTATGGACAAGATGATGAGTTCAGATCATTTTGTAGTGATTGTGTCATTTGTTTGGAGAACTTTATCATTGGTGAGTCCTGTCAAGCTCTGCCACTGTGCAATCACATGTTCCATTCATATTGCATAGAGCTTTGGTTGAAGGAAAATGACACATGCCCGGTTTGTAGAAATTGTTTATTAGACATATAG | 573 | 0.3805 | MSSVSQTFAPQASSDPSLTFSNFIAHAANVILILLLSLFMATILSTIVVLLLLKFCEYISDALLETLDDDIEDGRVRTLVVRSSLTYQGALNQISGSRERLQTFLQAYEMRSFHKRRHSQKLLPPHVIYGQDDEFRSFCSDCVICLENFIIGESCQALPLCNHMFHSYCIELWLKENDTCPVCRNCLLDI* | 191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod10g0997 | 190 | PANTHER | RING-H2 FINGER PROTEIN ATL3-LIKE | 12 | 189 | - | - | |
Dod10g0997 | 190 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 103 | 188 | IPR013083 | - | |
Dod10g0997 | 190 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 12 | 189 | - | - | |
Dod10g0997 | 190 | SMART | ring_2 | 142 | 183 | IPR001841 | - | |
Dod10g0997 | 190 | Pfam | Ring finger domain | 141 | 184 | IPR001841 | - | |
Dod10g0997 | 190 | SUPERFAMILY | RING/U-box | 141 | 188 | - | - | |
Dod10g0997 | 190 | ProSiteProfiles | Zinc finger RING-type profile. | 142 | 184 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod10g0997 | Dod-Chr10 | 28026996 | 28027738 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod10g0997 | 12 | 185 | C3H Transcription Factor Family | AT1G53010 | 28.889 | 5.49e-17 | 73.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod10g0997 | - | - | pvu:PHAVU_005G065200g | 184.882 |