Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0989 ATGGGTGGCATGTGTTGCAAGCCCTCTGCCATTGAGGACAGTAAGGAGAGTCCAAGGGAGCGTTTAACAGGCAAGGCAGCATTGGAATCACGTGCGTCTTCTAGGGGAACTTCATCAAGGAGGGAGGAATCGTATCGGGTGAAGGATAGATATGATAACAATGATGTGAGAGTTGGGTTGATTGATAAGCAAGGGAATGGCGCTGTTCGGGTGCAAATCGATCATTTCGAAAGGAAGAGGGAGAAAATGGAGTATGTCGTTGCTCCACATCCAGGGATTGGTGGTGTTCCTAAAGCCGTGGAAGGAGAGCAGATTGCGGCTGGATGGCCTACGTGGCTGGCGGCAGTGGCTGGAGAGGCTATCAAGGGATGGTTGCCTCGACGTGCTGATTCGTTCGAGAAGCTGGATAAAATTGGCCAGGGAACTTATAGTAATGTTTATAGAGCTCGTGATCTTGAACAAAAAAAGATTGTTGCTTTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTCCGCTTCATGGCAAGGGAAATTCACATTCTGCGTAGGCTTGATCATCCAAATGTCATAAAACTGGAGGGCCTGGTTACATCTAGGATGTCTTGCAGCTTATATCTTGTTTTTGAGTACATGGAGCATGACTTGGCTGGCCTTGCGTCACATCCAGGACTGAAGTTCACAGAAGCACAGGTAAAATGTTACATGCAGCAACTTTTACGCGGACTTGATCACTGCCACAGCTGTGGTGTGCTGCACCGTGACATTAAGGGTTCCAATCTTTTGATTGACAACAATGGAATCTTAAAAATTGCAGACTTTGGTTTGGCAAGCTTTTTTGATCCCAATCAAATTCAGCCATTGACTAGCCGAGTTGTCACTCTCTGGTATAGGCCCCCAGAGCTTTTACTCGGAGCAACTTACTATGGCACTGCTGTAGATTTATGGAGTACAGGTTGCATACTTGCTGAGCTGTATGCTGGCAAGCCTATAATGCCAGGAAGAACTGAGGTGGAGCAGTTACATAAAATTTTCAAACTTTGCGGTTCACCGTCTGAGGATTATTGGAGAAAGTCAAAATTGCCTCATGCAACAATATTTAAGCCTCAACAGCCCTATATGCGTCGTGTTGCTGAAACATTCAAGGACTTTCCTGCATCTGCAATAGACCTGATAGAGACCCTTTTGTCCATAGATCCTGCTGATCGTGGAACTGCAGCATCTGCTTTGAGGAGTGAGTTCTTCTCTACGAAGCCTCTACCTTGTGATCCTTCAATGTTGCCAAAGTATCCTCCTAGCAAAGAATTCGATGCCAAAGTACGTGATGAAGAAGCTAGAAGGCAAGGTGCAGCAGGAAGCAAGGGCCAGAAACATGACCTTGAGAGAAGAGGTGCAAGAGAATCACGAGCAATTCCTGCACCTGATGCCAATGCCGAACTGGTCTTGTCAATGCAGAAGAGACAAGGTCAGACCAATTCTCAAAGCAGGAGTGAGAAGTTTAACCCTCATCCTGAAGAAGTTGCTTCTGGATTTCCCATTGATCCCCCTAGGCCATCACAAGCTGCAGAAGTAGGCGCAGATCCCCAGGCATATCAGCATAAAAGAGCCTCCCATTCAGGTCCACTTACTCACCGTGCCGCATGGGCTAAAGCTGGAAAGAACCCGGATGACGCTCCAAAGATTTCAATGGGGGGTGACTTATCAACAATCTCTGGCTTAGTTGCAGCCAGGAGAAGTATGTTGTCTGATGATCGCAGAGAAAGGTCTGGATCATCACAAATGGAGGCTTCCAAACTAATAAGTAGGTTCCCGGGATCCTTCAAGGAGGCCTCGGAATCAATGATGCAACAGGATCAGAAGCATCATGCGCAAGCTCCTCAAAAGGAAGAAGGGAGAGGCGGCAACATAGACCCGATTCTTGTTGGTTATGGTTCCAAGGGTCCTAAAATCCATTATTCTGGTCCATTGCTAGTTCCATCAAGCAACATGGACCAGATGTTGAAAGACCATGACCGCCATATTCAAGAGGCGGCTAGACGAGCGCGTCTAGACAAGGCAAAGATGAAGAGACTCCAAGCTGAAGGGAACCAGATAACCAATTCATTATTTGTTTCTGGTCGTTGA 2127 0.4678 MGGMCCKPSAIEDSKESPRERLTGKAALESRASSRGTSSRREESYRVKDRYDNNDVRVGLIDKQGNGAVRVQIDHFERKREKMEYVVAPHPGIGGVPKAVEGEQIAAGWPTWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSCGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNQIQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYMRRVAETFKDFPASAIDLIETLLSIDPADRGTAASALRSEFFSTKPLPCDPSMLPKYPPSKEFDAKVRDEEARRQGAAGSKGQKHDLERRGARESRAIPAPDANAELVLSMQKRQGQTNSQSRSEKFNPHPEEVASGFPIDPPRPSQAAEVGADPQAYQHKRASHSGPLTHRAAWAKAGKNPDDAPKISMGGDLSTISGLVAARRSMLSDDRRERSGSSQMEASKLISRFPGSFKEASESMMQQDQKHHAQAPQKEEGRGGNIDPILVGYGSKGPKIHYSGPLLVPSSNMDQMLKDHDRHIQEAARRARLDKAKMKRLQAEGNQITNSLFVSGR* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0989 708 MobiDBLite consensus disorder prediction 548 567 - -
Dod10g0989 708 Pfam Protein kinase domain 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0989 708 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0989 708 Gene3D Transferase(Phosphotransferase) domain 1 215 455 - -
Dod10g0989 708 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Dod10g0989 708 Gene3D Phosphorylase Kinase; domain 1 119 214 - -
Dod10g0989 708 MobiDBLite consensus disorder prediction 610 635 - -
Dod10g0989 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Dod10g0989 708 Coils Coil 675 695 - -
Dod10g0989 708 MobiDBLite consensus disorder prediction 435 470 - -
Dod10g0989 708 PANTHER CELL DIVISION PROTEIN KINASE 1 690 - -
Dod10g0989 708 MobiDBLite consensus disorder prediction 484 499 - -
Dod10g0989 708 PANTHER CYCLIN-DEPENDENT KINASE 1 690 - -
Dod10g0989 708 MobiDBLite consensus disorder prediction 1 46 - -
Dod10g0989 708 MobiDBLite consensus disorder prediction 422 543 - -
Dod10g0989 708 MobiDBLite consensus disorder prediction 579 598 - -
Dod10g0989 708 CDD STKc_CDK9_like 132 416 - -
Dod10g0989 708 MobiDBLite consensus disorder prediction 12 26 - -
Dod10g0989 708 SUPERFAMILY Protein kinase-like (PK-like) 126 424 IPR011009 -
Dod10g0989 708 SMART serkin_6 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0989 Dod-Chr10 27951024 27958097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0989 124 540 Core Cell Cycle Gene Families AT5G10270 46.651 4.30e-120 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod10g0989 Pkinase 1.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0989 - - gmx:100792173 1277.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0989 10 27951024 27958097 Dod10g0989 10 27951024 27958097 ECH