Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0974 ATGGTGTTACTCAGATGTTTCTCGGTGACACTTCTGCAGTGGTGTATCTTGGCTTGCTTTCTTTGCTTCTCTGTGAGTCTCAGCAACCAGGCCTTATCCTGTGACCCGCTTGATTCAGCAGCGTTGAAGGAATTTGCAGGCAATCTTACAAAGGGCTCCATCATCATGACATGGTCCAATAATGATTCTTGCTGCAACTGGGACGGAGTTGTTTGTGATAATGTGACTGGTGGTGTTGGAGCAGCTGCTAGTAGGGTGACAAAGTTGTCCCTTTCTGGAATGGGTCTCAATGGTACAATTTCACCTTCTTTGGCACAGCTGGATCAGCTCAGTGTGCTGAATCTATCATTCAACCGTCTTGGAGGTAAATTGCCTGTGGAGTTCTTTAAGTTGAAGCAGTTGAAGATCCTTGATTTGAGCCACAACATGCTGTCTGGACCAGTTGCTGGAGCACTTTCTGGTTTGCAATCCATTGAAATATTGAACATTTCTAGCAATTTGTTTGCTGAAGATCTCTCCCAGTTTGGGGAGTTCCCTCATCTCCTTGCTCTCAACATGAGTAACAATTCATTCACTGGCAGGTTCAATTCTCAAATTTGCAGTTTTCCAAAGGGTCTCCATACCCTTGATTTATCTGTAAATCATCTTTTTGGTGGTCTTGAAGGCTTAGACAATTGCACCATATCTCTCCAACAGTTGCATTTGGATTCCAATTCATTTTCTGGCCCTCTTCCAGATTCCTTGTATTCAATGCTAGCCTTGAAGCAAATCTCAGTCTCGTCCAACAATTTATCTGGCCCGTTAAGCATGCAACTGAGTAAGCTTTCTAGCCTAAAAGCTCTGGTGCTTTATGGTAACCAGTTTTCAGGGGTGCTCCCAAATGTGTTTGGGAACCTTTTGAACCTGGAACAATTAGTAGCACACTCCAATTCATTTTCTGGACCATTGCCTCCTACCTTGGCTTTGTGCTCAAAGCTTAAGGTGCTTGATCTTCGGAATAATTCTCTGTCAGGTCATATTGATCTTAATTTCACTGGCTTGTCTAATCTTAGCACACTTGACCTTGCTAGTAATCATTTTAATGGATCTCTTCCAATTTCCTTGTCCTACTGCCATGAATTGAAAGTTTTAAGCCTTGGTAGGAATCTTTTAACAGGCCCTATCCCTGCAAGCTATGCCAACCTTACCTCACTTTCTTTTGTGACCTTCTCCAATAACAGCTTAAAGGGCTTAACTGGGGCTCTGTCTGTTCTGCAGCAGTGCAAAAATCTCAGCACTCTTATCCTCACTAGGAATTTTCATGGTGAGGAAATTCCAGAACGTGGTAATACTGGATTTGAGAACCTTATGGTTTTGGCATTTGGAAATTGTGGTCTTAAAGGTCATATTCCTTCTTGGCTATCAAATTGCAAGAAGTTGGGAGTCCTTGATTTGTCTTGGAACCAGTTGAATGGTAGTATTCCTCCTTGGATTGGTCAGATGGACAGTTTGTTCTACTTGGATTTATCAAATAATTCTCTGACAGGAGAAATACCAAAAAGCTTGACAGAGTTGAAGGGCCTCATGTTCGCGAATTGTACTCGACCAAATCTCACTGCTAATGCAGGCATTCCTCTCTTTGTTAAGAGAAACAAGAGTGCTAGTGGGCTGCAATATAACCAGGCCTCCAGTTTCCCTCCTTCAATATTGTTGAGCAATAACTCATTAACTGGAAATATATGGTCTGAAATTGGTCAATTGAAAGATCTGCATGTCTTAGATTTAAGCAGGAACAACATCACTGGTACCATTCCTAGCACTATCTCAGATATGGAGAACTTAGAAATATTAGATCTGTCTTATAATGATCTCGATGGAACAATTCCTCGATCATTTGACAACCTCACATTCTTGTCAAAGTTCAGCGTGGCATATAATCACTTGCACGGACCAATTCCAACCGGAGGGCAGTTTTTTAGCTTCCCTCGTTCAAGCTTTGAGGGCAATCAGGGGCTTTGTCGGGAAATTGACGCCCCTTGCGATGGTGTCAAGACTACGGGATTGAGACCCAATATTTCTTCTGGTTCTTCCAGAAAACGGGCTAGAAGCAATGTACTTGGCATAACAATCAGCATAGGGATAGGGCTTGCACTGCTTCTTGCAATTATTCTGATGAAAATGTCAAAGAGGGATGAGAATAAGCCAGTTGATCACTATGATGAGGAACTCAGTAGTAGGCCACACAGGTTATCTGAAGCACTTGTTTCCTCAAAATTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTCACGGTTGCAGATTTGTTGAAATCCACAAACAATTTCAACCAAGCAAATATTATTGGTTGTGGTGGGTTTGGTCTTGTGTACAAGGCAAATCTTCCAAATGGCACAAAAGCTGCTATCAAGAGACTTTCTGGGGACTGCGGTCAGATGGAACGAGAATTCCAAGCTGAAGTAGAGGCCCTTTCAAGAGCTCAGCACAAGAACCTTGTTTCTTTAAAAGGTTATTGTAGGCATGGCAATGACAGATTGCTAATTTACTCATACTTGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGTGTGTGGATGAGAATTCAACTCTAAAATGGGACGTAAGACTCAAGATTGCACAAGGTGCAGCTCGTGGATTAGCTTACTTGCACAAGGGGTGTGAACCATACATCGTGCATCGAGACGTGAAATCCAGCAACATACTGTTGGATGACAAGTTCGAAGCTCATTTGGCTGACTTTGGTCTGTCAAGGCTACTTCAACCTTATGATACTCATGTTACAACAGATTTAGTGGGAACATTAGGATATATTCCTCCAGAATATAGTCAGACACTGACGGCAACCTTCAGGGGTGATGTTTATAGTTTCGGCGTCGTTCTTCTCGAGCTTCTTACCGGTAGAAGGCCTGTGGAAGTCATCAAGGGGAAGAATTGCAGGAATTTGGTTTCTTGGGTTTTCCAGATGACGTCTGAGAATAAGGAGCAAGAAATTTTTGATCCAGCCATTTGGCAGAAGGTGCATGAGAAACAGCTATTGGAGGTGCTTGCCATTGCTTGTAAATGTCTAGACGAAGATCCAAGGATGAGACCGAGCATTGAAGTAGTTGTTTCATGGCTTGATAGTGTAGGGTTTGATGGCTCTCAAAAGTGA 3171 0.4257 MVLLRCFSVTLLQWCILACFLCFSVSLSNQALSCDPLDSAALKEFAGNLTKGSIIMTWSNNDSCCNWDGVVCDNVTGGVGAAASRVTKLSLSGMGLNGTISPSLAQLDQLSVLNLSFNRLGGKLPVEFFKLKQLKILDLSHNMLSGPVAGALSGLQSIEILNISSNLFAEDLSQFGEFPHLLALNMSNNSFTGRFNSQICSFPKGLHTLDLSVNHLFGGLEGLDNCTISLQQLHLDSNSFSGPLPDSLYSMLALKQISVSSNNLSGPLSMQLSKLSSLKALVLYGNQFSGVLPNVFGNLLNLEQLVAHSNSFSGPLPPTLALCSKLKVLDLRNNSLSGHIDLNFTGLSNLSTLDLASNHFNGSLPISLSYCHELKVLSLGRNLLTGPIPASYANLTSLSFVTFSNNSLKGLTGALSVLQQCKNLSTLILTRNFHGEEIPERGNTGFENLMVLAFGNCGLKGHIPSWLSNCKKLGVLDLSWNQLNGSIPPWIGQMDSLFYLDLSNNSLTGEIPKSLTELKGLMFANCTRPNLTANAGIPLFVKRNKSASGLQYNQASSFPPSILLSNNSLTGNIWSEIGQLKDLHVLDLSRNNITGTIPSTISDMENLEILDLSYNDLDGTIPRSFDNLTFLSKFSVAYNHLHGPIPTGGQFFSFPRSSFEGNQGLCREIDAPCDGVKTTGLRPNISSGSSRKRARSNVLGITISIGIGLALLLAIILMKMSKRDENKPVDHYDEELSSRPHRLSEALVSSKLVLFQNSDCKDLTVADLLKSTNNFNQANIIGCGGFGLVYKANLPNGTKAAIKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECVDENSTLKWDVRLKIAQGAARGLAYLHKGCEPYIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVFQMTSENKEQEIFDPAIWQKVHEKQLLEVLAIACKCLDEDPRMRPSIEVVVSWLDSVGFDGSQK* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0974 1056 Pfam Leucine rich repeat 448 507 IPR001611 GO:0005515
Dod10g0974 1056 Pfam Leucine rich repeat 583 641 IPR001611 GO:0005515
Dod10g0974 1056 Pfam Leucine rich repeat 109 167 IPR001611 GO:0005515
Dod10g0974 1056 Pfam Leucine Rich Repeat 325 344 IPR001611 GO:0005515
Dod10g0974 1056 Pfam Protein kinase domain 776 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0974 1056 Gene3D Transferase(Phosphotransferase) domain 1 851 1051 - -
Dod10g0974 1056 Gene3D Ribonuclease Inhibitor 174 411 IPR032675 -
Dod10g0974 1056 SUPERFAMILY RNI-like 227 531 - -
Dod10g0974 1056 SMART LRR_typ_2 107 130 IPR003591 -
Dod10g0974 1056 SMART LRR_typ_2 395 418 IPR003591 -
Dod10g0974 1056 SMART LRR_typ_2 275 298 IPR003591 -
Dod10g0974 1056 SMART LRR_typ_2 494 518 IPR003591 -
Dod10g0974 1056 SMART LRR_typ_2 131 154 IPR003591 -
Dod10g0974 1056 SMART LRR_typ_2 347 371 IPR003591 -
Dod10g0974 1056 SMART LRR_typ_2 604 627 IPR003591 -
Dod10g0974 1056 SMART LRR_typ_2 580 603 IPR003591 -
Dod10g0974 1056 SMART LRR_sd22_2 604 630 - -
Dod10g0974 1056 SMART LRR_sd22_2 131 157 - -
Dod10g0974 1056 SMART LRR_sd22_2 323 352 - -
Dod10g0974 1056 SMART LRR_sd22_2 580 603 - -
Dod10g0974 1056 SUPERFAMILY L domain-like 550 673 - -
Dod10g0974 1056 ProSitePatterns Protein kinases ATP-binding region signature. 781 803 IPR017441 GO:0005524
Dod10g0974 1056 SMART serkin_6 775 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0974 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 617 1049 - -
Dod10g0974 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 284 436 - -
Dod10g0974 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 165 - -
Dod10g0974 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 444 513 - -
Dod10g0974 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 562 619 - -
Dod10g0974 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 174 283 - -
Dod10g0974 1056 Gene3D Ribonuclease Inhibitor 412 679 IPR032675 -
Dod10g0974 1056 CDD STKc_IRAK 781 1047 - -
Dod10g0974 1056 Pfam Leucine rich repeat N-terminal domain 38 73 IPR013210 -
Dod10g0974 1056 Gene3D Phosphorylase Kinase; domain 1 737 850 - -
Dod10g0974 1056 SUPERFAMILY Protein kinase-like (PK-like) 757 1046 IPR011009 -
Dod10g0974 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 617 1049 - -
Dod10g0974 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 562 619 - -
Dod10g0974 1056 Gene3D Ribonuclease Inhibitor 38 173 IPR032675 -
Dod10g0974 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 284 436 - -
Dod10g0974 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 165 - -
Dod10g0974 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 444 513 - -
Dod10g0974 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 174 283 - -
Dod10g0974 1056 ProSitePatterns Serine/Threonine protein kinases active-site signature. 897 909 IPR008271 GO:0004672|GO:0006468
Dod10g0974 1056 ProSiteProfiles Protein kinase domain profile. 775 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0974 1056 PRINTS Leucine-rich repeat signature 604 617 - -
Dod10g0974 1056 PRINTS Leucine-rich repeat signature 497 510 - -
Dod10g0974 1056 SUPERFAMILY RNI-like 63 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0974 Dod-Chr10 27750495 27754955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0974 13 1055 Receptor kinase-like Gene Family AT1G55610 33.620 6.75e-167 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dod10g0974 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0974 - - gmx:100797812 1694.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0974 10 27750495 27754955 Dod10g0974 10 27750495 27754955 ECH