Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0971 ATGACTGCCAGAGAAATCCTCAGTAAGATGAAGGAAAAAGTTAAAGTTGGGTTGGGTACATCTGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCGAAGAGCATAACTCACGGCTTTCACTTGGTGAAGGGCAGATCATATCATGCAATGGAGGACTATGTTGTTGCTCAATTTAAGCAAGTTGATAACAATGAATTAGGCTTGTTTGCAATATTTGATGGCCACGCGGGTCACAATGTACCTAATTACTTGCAGTCTCATTTGTTTGAAAACATCTTAAAAGAGCCTGACTTCTGGAAAGATCCTGAAAATGCTGTCAAGAGAGCCTATAGTATAACGGATTCTAGTATTTTGGAGAAATCAGGTGAATTGGGCAGAGGTGGTTCAACTGCAGTTACTGCAATATTGATCAATTGTCAGAAGTTAGTAATAGCCAACATTGGTGACTCACGGGCTGTCTTATGTGCGAATGGTGTGGCCAAACAACTATCAGTGGATCATGAGCCACACGCTGAAAGTGAGGATATAAAAAATAGAGGTGGCTTTGTATCAAAATTTCCAGGGGACGTCCCGAGGGTTGATGGACGGCTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAACCACATGTGACGGTGGAGATGATTCAAGATGATGTAGAGTTTATTATATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAATACTATCAAAGACATAAAGGATGCTCGGGCTTCAGCGAAACGCCTCACTGAAGAAGCAGTAAACAGGAAAAGCACAGATGATATCTCCTGCATTGTTGTGAAATTTCAGTGA 858 0.4149 MTAREILSKMKEKVKVGLGTSDPDSGKGKSKMSKSITHGFHLVKGRSYHAMEDYVVAQFKQVDNNELGLFAIFDGHAGHNVPNYLQSHLFENILKEPDFWKDPENAVKRAYSITDSSILEKSGELGRGGSTAVTAILINCQKLVIANIGDSRAVLCANGVAKQLSVDHEPHAESEDIKNRGGFVSKFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVEMIQDDVEFIILASDGLWKVMSNQEAVNTIKDIKDARASAKRLTEEAVNRKSTDDISCIVVKFQ* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0971 285 SMART PP2C_4 27 282 IPR001932 -
Dod10g0971 285 ProSiteProfiles PPM-type phosphatase domain profile. 37 284 IPR001932 -
Dod10g0971 285 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
Dod10g0971 285 SUPERFAMILY PP2C-like 33 284 IPR036457 -
Dod10g0971 285 CDD PP2Cc 44 284 IPR001932 -
Dod10g0971 285 Coils Coil 247 267 - -
Dod10g0971 285 PANTHER PROTEIN PHOSPHATASE 2C 1 285 IPR015655 GO:0004722|GO:0006470
Dod10g0971 285 Pfam Protein phosphatase 2C 49 277 IPR001932 -
Dod10g0971 285 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 285 - -
Dod10g0971 285 Gene3D - 32 285 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0971 Dod-Chr10 27723542 27726570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0971 1 285 PP2C-type Phosphatase Gene Family AT3G15260 75.779 8.13e-165 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0971 K17506 - gmx:100500617 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0971 10 27723542 27726570 Dod10g0971 10 27723542 27726570 ECH