Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0970 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCACTTCATGAGGCACTCAGAACCGTCTGTCTCAACACAGACTGGACTTACTCTGTCTTCTGGACCATCCGTCCACGCCCAAGAGTAAGAGGTGGTAATGGCTGCAAGGTTGGAGATGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGGTTCAGCATCAGGTTGTCTGGAAGACATTGATGGAGGCGAGGATGCTGTCAGGAAGGCCTTCAGCAAGATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCTTCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAGCCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACCGACCAGTTTGATTCAGGCATTCAGGTCAGAAGCAGAATCATTGTTAGCCTTATTGTTATTTTGGTCTCCCAATTTTTTTTTTCTTTTTCATATGAAATTTTAAGCCTTTTCTTCTACCAAAGAGTTTATTTATGTCTGTATTTGTTTCATGGTCAGACCATTGCTGTAATCCAAGCTGGACATGGCCTTCTGCAACTCGGTTCTTGCAAGATTATTGCTGAAGACCTCCATTTTGTGCTAAGAATGAGACACACTTTTGAATCCCTTGGCTACCAGTCTGGTTTTTACCTGTCTCAACTCTTCTCTTCAACTAGGAACACTTCCTCCTCTACTTCAATCCCTTCAAAACCATCCACCATACCAATTAGGCCACCTCCACCGCTATTCAACTGGGGTCAGAGGCCACTTGCATCTGCTGCTACTTCCATGCTCTCATCACCAAATTTCCAACAGCATGCAGCATCTAGATTAGGCTTTCCTCCACAGGCCAAAGATGAGACACACATGTTCCTAATGCCTCATGCATCTGAGCCAGCAAGGATTGAGGACATGATGGGGGAGCAGCATGAGAATGACATAAAATGGCCTAATGGATTGTCATTCTTCAATGCTCTCACTGGAAGAACAGATGATGCCAACAAGCTTTTGTTCAATCAAGATAGCTTGGGGAGCAAACCAGGTGATCCGAATCACCACCATGCTCTCAACCAAAACCACCCCAATTCATCTGATGCCTCCAACATGCAGCAAAATGCTGGTGGAGCCAACCCAAATGAGTTCTTGAGCTTGGATAGCAGCCACCCTGAAGGTGCAAGGAAAATGGACAAGTTCAAGAGGAGCTTCACTTTACCTGCTAGAGTGGCCTCATCATCTTCATCCACTTCAATGGATCAACACCATCAACAGCAACAACAAACTGTCGAGTATAGGAACTCAGATGGTGTTATGTTCCCGGATGTTATGGAGACCTTTTTGGAGTGA 1425 0.4561 MVGSGASDRSKEAVGMMALHEALRTVCLNTDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRGSASGCLEDIDGGEDAVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFDSGIQVRSRIIVSLIVILVSQFFFSFSYEILSLFFYQRVYLCLYLFHGQTIAVIQAGHGLLQLGSCKIIAEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSIPSKPSTIPIRPPPPLFNWGQRPLASAATSMLSSPNFQQHAASRLGFPPQAKDETHMFLMPHASEPARIEDMMGEQHENDIKWPNGLSFFNALTGRTDDANKLLFNQDSLGSKPGDPNHHHALNQNHPNSSDASNMQQNAGGANPNEFLSLDSSHPEGARKMDKFKRSFTLPARVASSSSSTSMDQHHQQQQQTVEYRNSDGVMFPDVMETFLE* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0970 474 MobiDBLite consensus disorder prediction 432 456 - -
Dod10g0970 474 MobiDBLite consensus disorder prediction 366 419 - -
Dod10g0970 474 MobiDBLite consensus disorder prediction 382 411 - -
Dod10g0970 474 PANTHER GB|AAF34833.1 1 474 - -
Dod10g0970 474 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 234 IPR025610 -
Dod10g0970 474 PANTHER GB|AAF34833.1 1 474 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0970 Dod-Chr10 27712312 27715601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0970 20 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 25.806 1.35e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0970 - - gmx:100814723 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0970 10 27712312 27715601 Dod10g0970 10 27712312 27715601 ECH