Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0969 ATGGCTGATATAGCAGGTCTAGTTGAGGCTGCAGGATCAAGATTCACCTCATTGGAGCTTATTGGGCAGGGATCATTTGGCGACGTCTACAAAGGGTTTGACAAGGAGCTCAATAAAGAAGTTGCCATCAAAGTAATCGATTTGGAAGAATCAGAGGATGAAATTGAGGATATTCAGAAGGAAATTTCTGTTCTGTCACAATGTCGATCTCCATACATTACTGAGTACTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCTGATCTCCTCCAATCAGGTCCTCCACTTGATGAAATGTCAATTGCTTGCATTCTCCGTGACTTGCTGCATGCAGTTGATTACCTACATGCTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACTGAGAATGGTGATGTAAAGGTTGCCGATTTTGGCGTTTCTGCACAGCTAACAAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTTATTCAGAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACTGCAATTGAGATGGCAAAAGGGGAACCTCCGCTTGCTGATCTTCACCCTATGAGAGTGCTTTTCATCATACCTAGAGAAAATCCTCCGCAGCTGGATGAGCATTTTTCTCGTTCCTTGAAAGAATTTGTTTCATTGTGTTTAAAGAAAATTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTATCAAACACCGCTTCATTCGGAATGCTAGGAAGAGTCCAAAGCTTTCGGAAAGAATAAGGGAGCGTCCAAAGTACCAGATAAAGGAAGATCAGAGTACGCCTAGAAATGTTCCGAGAGGGATGGGGGAGGCATCTGATACTATGAAGGTGGCAAGAGACATAAGGGCTGAAGAAACTAATAGATCCAGTGGTCAGGGTCAGACCCTGAAAAGTTCTGGATGGGACTTCAGCATTGGTGGATCACAGGGCACTGGAACCTTTCGAAGTGTAGCACGACCACCTCAGTCTAGAGACAAGAAAACTGAAGTTTTACAAAATCAGCTTACCCAAAGAAAAGCTCCAGAGAGCGGCTATCAAGGGGGATCTGCCAATAGAAGTGCACTAAATGAGTCCTTTGAAAGTTCGTTTGGAAAAGATCTTAGAGTTCCCTATCATGATGAGGATCTGGATAATCACCTTGAAGATGATGAATTGTCTGGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGAATCAAGGCCATCAGTGTTTCGTGGCCAAAGCTCCCAGTCTAGCAGCAGTTATGCTTCTTTTGAAGATGCGTCTACCAGCGGAACTGTTGTTTTTCGTCACCAGCATGATGATTCTGATTCTCCAGAGACACCTAGGTCCCGAGTGGCACATAATGACAGAAATTCAAATGCTTCACTGGAAGATAGTGCTGCAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGCAGGGCTAAGGAAAGCAAATGTGAGAGAGAGATCAGCGGGAAAAATCAACAACATACTGGAAAGCAAGAGAGAACAAATGACTAGCAGCTCTGATTCTTCAAGATCAAATCGGGAATACATTGATGCACAAAAGGCCATCTCAAGATCACATTATGCTAGTGATGATGAAGAAAGTGCTAAAATAATGTCATCCTCTGTGCCCTTATCCCTGTTGCTTATTCCTTCACTAAAAGAGGCCTTTGCTAATGATCCAGAAGGGCCAACCGTGCGCGCAGTTATCAATTCTCTCGTAAACATGGAGCGCACAAAGCCTAGATCCTGTGATGTTCTCGTCAAAAAGCTGCTTCAGCAATTGGCAAGTTCAAATGAAGATTCATTGAAGGAGCTGCAGGAACTGGCAGGCCAACTATTCAGCAAGACCAAGGCAAACGCTGAAGCGGATAACCGGAAAAAACAACAGAACAAGGATCTTCATCAAAATAGCAATTTAAGCCCACTTGCAAGATTCCTTCTCTCAAGGTTTATGGAAGTTATCATTTTCTATGTGAACAGCTTTATTCTGAAAAATAGTTGTTATTTGATGGAGCAATTTTTCCCTAGCTTTAGTGGGGTGGTGGCTTGCTAA 2151 0.4296 MADIAGLVEAAGSRFTSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAVDYLHAEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRSLKEFVSLCLKKIPAERPSAKELIKHRFIRNARKSPKLSERIRERPKYQIKEDQSTPRNVPRGMGEASDTMKVARDIRAEETNRSSGQGQTLKSSGWDFSIGGSQGTGTFRSVARPPQSRDKKTEVLQNQLTQRKAPESGYQGGSANRSALNESFESSFGKDLRVPYHDEDLDNHLEDDELSGNGSGTVVIRSPKESRPSVFRGQSSQSSSSYASFEDASTSGTVVFRHQHDDSDSPETPRSRVAHNDRNSNASLEDSAANLAEAKAAIQAGLRKANVRERSAGKINNILESKREQMTSSSDSSRSNREYIDAQKAISRSHYASDDEESAKIMSSSVPLSLLLIPSLKEAFANDPEGPTVRAVINSLVNMERTKPRSCDVLVKKLLQQLASSNEDSLKELQELAGQLFSKTKANAEADNRKKQQNKDLHQNSNLSPLARFLLSRFMEVIIFYVNSFILKNSCYLMEQFFPSFSGVVAC* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0969 716 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Dod10g0969 716 MobiDBLite consensus disorder prediction 321 352 - -
Dod10g0969 716 MobiDBLite consensus disorder prediction 529 545 - -
Dod10g0969 716 MobiDBLite consensus disorder prediction 273 392 - -
Dod10g0969 716 SUPERFAMILY Protein kinase-like (PK-like) 12 326 IPR011009 -
Dod10g0969 716 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0969 716 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 684 - -
Dod10g0969 716 Coils Coil 624 644 - -
Dod10g0969 716 CDD STKc_MST3_like 13 287 - -
Dod10g0969 716 MobiDBLite consensus disorder prediction 411 455 - -
Dod10g0969 716 MobiDBLite consensus disorder prediction 467 492 - -
Dod10g0969 716 MobiDBLite consensus disorder prediction 424 455 - -
Dod10g0969 716 MobiDBLite consensus disorder prediction 529 548 - -
Dod10g0969 716 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0969 716 MobiDBLite consensus disorder prediction 361 392 - -
Dod10g0969 716 MobiDBLite consensus disorder prediction 273 290 - -
Dod10g0969 716 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 684 - -
Dod10g0969 716 Coils Coil 650 670 - -
Dod10g0969 716 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Dod10g0969 716 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0969 716 Coils Coil 41 68 - -
Dod10g0969 716 MobiDBLite consensus disorder prediction 467 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0969 Dod-Chr10 27658317 27668054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0969 1 684 MAP Kinase Kinase Kinase Kinase AT3G15220 65.988 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Dod10g0969 Pkinase 5.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0969 K08838 - gmx:100786501 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0969 10 27658317 27668054 Dod10g0969 10 27658317 27668054 ECH